Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01610 ATGAGTAGTACTGTAGAAATACATAGACATCATAGCTGCCAACTAACTATTGGACATTACTTCACAATCCTCAGGCGTATCTTTAATTTTGCTAGGAGCATATCCATAGTTTGCAAGAAAATTCAAGCCACCAACGGGAAGTCACTAACCAAATCCAGCTCCACTGCTTGCCAAATAAGggtcattcgaatgacgacacccccgccatctcccacacagcctgagattccttctgaggggacgtctaggaaaactagacaagccactcggctaagaagattgggccgagtttgcaaaaatgaggcaaacccctacttggaaggggatacggaaaaaggcacaagagattcaaaatgtatccacaatgcaaacagtagacgtcaagagtgtgaaaattacattggaaggtggttgacggaagcaggaaaacaaatttacatagcaccttatttaaatcaggcccattggcagctccttgtattgtgcccaggtgacaatgtagtggtttggttttgttctttgcgaaagaggtcggatgctgccatcaagggtgcaataaacagtgcaatgaaatcagtcaccaaaactgcagagggaaagccacctcagcatgggcctcagtggattgaagctaagagtcatgttcaaacaggaaattatgagtgtggatactatgttatgcattggatatggtgcatcgtaactggtggattgaaggatgactggattcactggttttctgatcgatcaccgGTGTTGACTGCAATTGGAAACTTCTGCATATGTTCAATTGTTGTGGGGATGGTTATTGAGATTATTGTTATGTATCCCATTCAAGATCGAGAATATCGCCCGGGAATCGATAACCTTCTTGTGCTTCTTATTGGTGGAATTCCAATTGCCATGCCCACTGTCCTCTCGGTGACTATGGCCATTGGTTCTCACAGGCTATCACAGCTGGGGGCTATCACAAAGAGAATGACAGCTATTGAAGAGATGGCAGGCATGGATGTGCTTTGCAGTGATAAGACTGGGACCCTAACACTAAATAAGCTTACTGTTGACAAAAATCTTATAGAGGTTTTTGCAAAAGGAGTGGATGCGGATACTGTTGTTTTGATGGCAGCTCAAGCTTCAAGACTTGAGAATCAAGATGCAATAAACACTGCCATAGTTGGAATGCTGGCTGATCCCAAAGAGAACGTGGGCAATGTAGAAATTCCTACTCCCAATGATGGAGTTGGTAGGGGTTATGGACAGGGTAAGGGATACGGTGCAAGTGAAGGAAACAATGTAGATGGTGCTGGCGGAGTAGGAGGGGAGGTGGTGGTGGTGGAGAGGGTGGAGTTATTGGTGAAAGTGGTGTGGGATATGGTTAGGGTGGTGGTTTTGGGGTTGGGGTAG 1404 0.2635 MSSTVEIHRHHSCQLTIGHYFTILRRIFNFARSISIVCKKIQATNGKSLTKSSSTACQIRVIRMTTPPPSPTQPEIPSEGTSRKTRQATRLRRLGRVCKNEANPYLEGDTEKGTRDSKCIHNANSRRQECENYIGRWLTEAGKQIYIAPYLNQAHWQLLVLCPGDNVVVWFCSLRKRSDAAIKGAINSAMKSVTKTAEGKPPQHGPQWIEAKSHVQTGNYECGYYVMHWIWCIVTGGLKDDWIHWFSDRSPVLTAIGNFCICSIVVGMVIEIIVMYPIQDREYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQLGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKGVDADTVVLMAAQASRLENQDAINTAIVGMLADPKENVGNVEIPTPNDGVGRGYGQGKGYGASEGNNVDGAGGVGGEVVVVERVELLVKVVWDMVRVVVLGLG 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01610 467 SUPERFAMILY Calcium ATPase, transmembrane domain M 252 335 IPR023298 -
Gma18g01610 467 PANTHER CALCIUM-TRANSPORTING ATPASE 252 404 - -
Gma18g01610 467 MobiDBLite consensus disorder prediction 64 86 - -
Gma18g01610 467 PANTHER PLASMA MEMBRANE ATPASE 252 404 - -
Gma18g01610 467 Pfam Ulp1 protease family, C-terminal catalytic domain 130 237 IPR003653 GO:0006508|GO:0008234
Gma18g01610 467 ProSitePatterns E1-E2 ATPases phosphorylation site. 342 348 IPR018303 -
Gma18g01610 467 Gene3D - 251 336 - -
Gma18g01610 467 SUPERFAMILY Cysteine proteinases 136 238 IPR038765 -
Gma18g01610 467 Gene3D - 337 351 IPR023214 -
Gma18g01610 467 Gene3D - 352 404 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01610 Gma-Chr18 44965086 44977111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01610 252 400 Primary Pumps ATPases AT5G62670 93.960 4.66e-86 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01610 K01535 - gsj:114376456 284.648