Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01603 ATGACTACACTTAAAGTCTTGTGTGTGTTTGGCGTTCCACATTTGGTTGTGTTGAGGCATTTGGTTTCCTCAGATGCCTCATGTGAGATGAGGAAGAAAATCATAGATCCCTCATCCGTCGTCAGAATCAACCTCAACCATGGTGACATTGCCAGATACCTATCGAAGGAGCCAAGTTTACTTACTGAACTCGTGCTTCTCCACATCAACACTAACCGCTTCTGCGGCACTGTGCCACACAAGTTTGACAAACTGAAACTCCTATTCGAGTTAGATCTCAGCAACAACTGCTTCGTCGAGAAGTTCCTCGATGTGGTGTTGTGTTTGTCACAGCTCAAGTTTCTAGATCTAAGATTCAACAAATTCAAAGCTACGTGGCAAAGTAGGAAGATAGGGGGATCCGAGATCAACACGATTTATGATCAGTCATGGATATGGATTTTGAACACAAACACGATCAGAATCCGGTGCACTCGGTGGAGGACAACGGAGTAG 495 0.4465 MTTLKVLCVFGVPHLVVLRHLVSSDASCEMRKKIIDPSSVVRINLNHGDIARYLSKEPSLLTELVLLHINTNRFCGTVPHKFDKLKLLFELDLSNNCFVEKFLDVVLCLSQLKFLDLRFNKFKATWQSRKIGGSEINTIYDQSWIWILNTNTIRIRCTRWRTTE 164
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01603 164 Pfam Leucine rich repeat 63 122 IPR001611 GO:0005515
Gma18g01603 164 SUPERFAMILY L domain-like 36 124 - -
Gma18g01603 164 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 38 130 - -
Gma18g01603 164 Gene3D Ribonuclease Inhibitor 16 141 IPR032675 -
Gma18g01603 164 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 38 130 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma18g01603 Gma-Chr18 44734941 44737470 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01603 39 125 Leucine-rich Repeat extension Gene Families AT4G13340 65.517 2.06e-33 122
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01603 - - gmx:106799218 122.094