Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01601 ATGGAGTGTGAAGTTGAATTACAAGGGGGAGATCTGCATGCAGGGGTGGTAACTGAGCCAAACCCTATTGGTTTTGGCACCATGGAAAACGAACACACTTTGGCGGTTGCTGAGAGAGAGATGTGGCTGAACAGTGACCAAGACGAGTTCCTAGGAGTCAATGATGCTTCCATGTTCTACGCCGATTTCCCTCCTCTCCCTGATTTCCCTTGCATGTCATCATCATCATCTTCTTCTTCAGCACTACCATTTCCTGTGAAGACCATGACATGTTCCACCAGAACCACAACAACAACCACCACTTCCTCTTCTTCCTCTTCCTCATCCTGGGCCGTGTTGAAGTCAGATGCTGAGGAAGATGCAGAGAAAAATCATTGCAACCGCTACATGCATGACCAACTTGATGCAACTTTGTCTTCCACTGCTTCCATGGAGGTTTCTCAACAGAAAAACCTCGATCCTGGGCTTGGTGGCCCTGTTGGTGAGTGCATGGATGATGTTATGGACACTTTTGGGTACATGGAGCTTTTGGAGGCCAATGATTTCTTCGACCCTGCCTCTATCTTTCAGAACGAGGATAACGAAAACCCTTTAGTAGATTTCGGCACACTGGAGCAGCATGTGCCGTTGCATGATGAGCAACATGAAATGTTGCATCATCAGCAAGGGAGAACAGAAGAGGTTGATCATCAGGTTCCTGTGTGTGAAGAGATCCAAGGAGATGAAGAAGGTGGTGATGGTGTTGGAGTAGACGATGAGATGAGTAATGTGTTCTTGGAGTGGCTCAAGTCTAACAAGGATAGTGTCTCTGCTAATGATTTGAGGAATGTGAAGCTCAAGAAGGCGACGATTGAAAGTGCTGCGAGGCGGCTAGGGGGAGGAAAAGAAGCCATGAAGCAGTTGCTGAAGCTGATTCTTGAGTGGGTTCAAACCAGCCATCTTCAGAATAAGCGGCGTAAGGAGAATAACGGTAGCAGTATTAGCAGTGCACTTCAGGCACAGTTTCCGGATCCTAGTGTCCAGAACAACCAGAATACACAAAGTGGTTCATTTTCACCTGAATCAAACGCTTGTTTCAACAACCAGACACCGTGGTTGAGTCCTCAAACTTTTGCAACAGATCAGGCTCCTCTCATGGTGCCTCCACAGCAATTTCAACAACCCATGGTTGGGTATGTGGGTGACCCTTACACTAGTGGTGCTGCTTCAAATAACATCACAACTTCTCATAATCATAACAGCAACAACCCCTATCAACCTGGTGCAGAACAATATCACATGTTGGAGTCGGCACATTCATGGCCTCATTCTCAGTTCAATGTTGCTTGTCACTATAGCCAGTCTTTTGGGGACAATAATGTTATTTTCCCACAGGGGGGTTTTGGTGGTGGCTATGGCAATAACCAGTACCCTTACCAGTTTTTTCATGGCCCTGGTGATACGTTGATGAGGTTGGGGCCCTCGGCGACGAAGGAAGCGAGGAAGAAGAGAATGGCGAGGCAGAGAAGGTTTCTGTCTCATCACAGGCATCATAATGGTAATCACCAGAATTCAGGGTCAGACCCACATGCAAGATTGGGGGGTGGTGATAATTGCACCACTGGTTTGGCTGCACCTCATCATGCAAATCCTACAGCCAATTGGATGTACTGGCAGGCTATGACGGGCGGTGCGGCGGGTCCTTTGGCTCCCCCGGCCGAGCCGCCAGCTGTGGACCGGTCTGCCTTGCAGACACAGAATTGTCATCAGAGTCGAGTTGCATCAGATAGGAGACAGGGTTGGAAGCCTGAGAAAAACTTGAGGTTCCTTCTGCAGAAGGTGTTGAAACAAAGCGATGTGGGAAGTTTGGGGAGAATAGTTTTGCCAAAAAAAGAGGCAGAAACCCATTTGCCAGAGCTGGAGGCAAGAGATGGAATTTCCATAACAATGGAAGACATTGGAACTTCACGTGTTTGGAACATGCGCTATAGATACTGGCCGAACAACAAAAGCAGAATGTATTTGCTCGAGAACACTGGTGACTTTGTGAGAGCCAATGGACTCCAAGAGGGAGATTTCATAGTGATATACTCAGATGTGAAGTGTGGCAAATATATGATAAGAGGAGTGAAAGTGAGACAACAAGGTGTGAAACCAGAGACCAAGAAAGTAGGAAAATCGCAGAAAAACCAGCATGGGACAGGGACAAATGCATCAACTACAGCTTGTACTGCTGCTAATAATGGCACGCCATCGTCACCGAAAACCAAAGCTGAAAAAAAAACATGTCATTTGGTCATCAAATGTGTCCAATATTGTTGGATCAAACTCTACTACTTCCAAACTTTTAGATTCTGGGACCTTGTACTACAAGAAAGAACCACAGGAAGCAACATATGGGAGAGTTTCCAGCATCCTTCAAATGCAATGTTACCCAATATGAAGCTTAGAATTGACAAAGTAACTGGTAAGAAAGTGAAACTAACTTCATGGAAAAGCCCTTCTGATCCACACAATGGGAGCTTCTCTTTGAGTGTTGAACGCCTTAGTATACCTGAAGTGTTCATTTGGAACCAAACGCGCCCGTTATGGCGCACCAATCCGTGGAATGGTAAGGAAATGTTCGAACACTTTTTTCGGGAAGTACAAGAGATTGGCTTGATAGTCTATGGGAGCAAACCTTTGCAGTGTGATAGGGCCAAAGATCAAAATACAAGTGCAGATAATGAAGCAGATGATGGCCTTTTGAAGCTGTCAAGGGTCAATGTTCTAGATTTTGCAGATGGGTCATCTCTCACACTTCAACCAGACACATGCCGAAGTCAATGTTTGGAGAATTGCATATTCATATGA 2832 0.4601 MECEVELQGGDLHAGVVTEPNPIGFGTMENEHTLAVAEREMWLNSDQDEFLGVNDASMFYADFPPLPDFPCMSSSSSSSSALPFPVKTMTCSTRTTTTTTTSSSSSSSSWAVLKSDAEEDAEKNHCNRYMHDQLDATLSSTASMEVSQQKNLDPGLGGPVGECMDDVMDTFGYMELLEANDFFDPASIFQNEDNENPLVDFGTLEQHVPLHDEQHEMLHHQQGRTEEVDHQVPVCEEIQGDEEGGDGVGVDDEMSNVFLEWLKSNKDSVSANDLRNVKLKKATIESAARRLGGGKEAMKQLLKLILEWVQTSHLQNKRRKENNGSSISSALQAQFPDPSVQNNQNTQSGSFSPESNACFNNQTPWLSPQTFATDQAPLMVPPQQFQQPMVGYVGDPYTSGAASNNITTSHNHNSNNPYQPGAEQYHMLESAHSWPHSQFNVACHYSQSFGDNNVIFPQGGFGGGYGNNQYPYQFFHGPGDTLMRLGPSATKEARKKRMARQRRFLSHHRHHNGNHQNSGSDPHARLGGGDNCTTGLAAPHHANPTANWMYWQAMTGGAAGPLAPPAEPPAVDRSALQTQNCHQSRVASDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQQGVKPETKKVGKSQKNQHGTGTNASTTACTAANNGTPSSPKTKAEKKTCHLVIKCVQYCWIKLYYFQTFRFWDLVLQERTTGSNIWESFQHPSNAMLPNMKLRIDKVTGKKVKLTSWKSPSDPHNGSFSLSVERLSIPEVFIWNQTRPLWRTNPWNGKEMFEHFFREVQEIGLIVYGSKPLQCDRAKDQNTSADNEADDGLLKLSRVNVLDFADGSSLTLQPDTCRSQCLENCIFI 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01601 943 ProSiteProfiles B3 DNA-binding domain profile. 604 706 IPR003340 GO:0003677
Gma18g01601 943 MobiDBLite consensus disorder prediction 336 366 - -
Gma18g01601 943 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 26 751 - -
Gma18g01601 943 MobiDBLite consensus disorder prediction 92 113 - -
Gma18g01601 943 Pfam D-mannose binding lectin 780 825 IPR001480 -
Gma18g01601 943 SUPERFAMILY alpha-D-mannose-specific plant lectins 782 830 IPR036426 -
Gma18g01601 943 Pfam B3 DNA binding domain 605 701 IPR003340 GO:0003677
Gma18g01601 943 SUPERFAMILY DNA-binding pseudobarrel domain 603 699 IPR015300 -
Gma18g01601 943 MobiDBLite consensus disorder prediction 92 116 - -
Gma18g01601 943 MobiDBLite consensus disorder prediction 507 532 - -
Gma18g01601 943 MobiDBLite consensus disorder prediction 721 749 - -
Gma18g01601 943 Gene3D - 600 719 IPR015300 -
Gma18g01601 943 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 26 751 IPR044800 GO:0003700
Gma18g01601 943 CDD BfiI_C_EcoRII_N_B3 602 703 - -
Gma18g01601 943 MobiDBLite consensus disorder prediction 711 750 - -
Gma18g01601 943 SMART B3_2 604 706 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01601 Gma-Chr18 44626603 44637988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01601 39 737 B3 DNA Binding Superfamily AT3G24650 46.879 7.75e-161 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma18g01601 B3 5.2e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01601 - - gmx:100810343 1431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01601 18 44626603 44637988 Gma08g03284 08 49607369 49610655 GST