Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01595 ATGTCAGGGCAGAGAAGGTCGTCAAGAACTTCAAAGTTCACTGAGATTGAGATTAATGAACTTGTGTCTAGGTTACAAGTTCTGCTTCTGCAAGTGAACCAAAGAGGCAACTCAAGGCAATCAGCGTCCAAGATCTTGCAGGAAACCTGCTGTTACATTAGGAAGCTGCAGGAAGAGGTGGAACAGCTCAGTGAGAGACTATCAGAGCTCATGGATTCTGTGGATATCAGTGACATTGACAGAAGAACTTTACAAAACCTTTTGCAACAATATTAA 276 0.4239 MSGQRRSSRTSKFTEIEINELVSRLQVLLLQVNQRGNSRQSASKILQETCCYIRKLQEEVEQLSERLSELMDSVDISDIDRRTLQNLLQQY 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01595 91 PANTHER DNA BINDING PROTEIN 1 90 IPR044172 -
Gma18g01595 91 PANTHER DNA BINDING PROTEIN 1 90 - -
Gma18g01595 91 Gene3D - 16 91 IPR036638 GO:0046983
Gma18g01595 91 Coils Coil 46 73 - -
Gma18g01595 91 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 17 74 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01595 Gma-Chr18 44445897 44448018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01595 1 75 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 48.101 5.41e-15 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma18g01595 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01595 - - gmx:100810266 95.9005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01595 18 44445897 44448018 Gma08g03279 08 49547713 49549323 GST