Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01583 ATGCCAGAAAATAAGACAGGAAACTTGTTAGGTACCAACACTGGTAAGGATCCTACCATGTTTCCTAAACATGCCCAAGCTCAACCAGAATTATCCAGTGGTGTCTCAAATACTGGACGTCATGTAAATAATAACAATATTGCTATACAGGCAGGAGAAGAATTTTCTACAAATGTTGGTTGTGATGGAATTGCTGCTGGAAGGGTTCCTGTTTCACCTGATATACCTCGATATTGTGAGAATGTGTTTGGGTTGAACAGGGAGAATGGCCATGTGAGATATGAAGATCTTACTAATATTCTGGGGTTGAGGAGAATGGACTCTGAGAGTTCTTCTGATATATCTGACTTTGTCGCTATAAAACAGCCAGCACAGGAGATGGAAAATGGAGCTTCTGCCAACATTTTAAGCAAAATTCAGAAGAGAGATGGTGTGTCAAGGAAGGTTTTTCAAGAACCAGTTGGTGTCCAGTCTAGTCTCGCTTCAGCTGTATCACCCCTTCGCAGATATGAAGCTTCTCAGTCCAATGGATTTTCCGGTTTGGGAATTTTAGATGATTTTCAGTCTGGGAAAATGAAGTTTCTATGCAGCTTCGGTGGAAAAATATTACCAAGACCCAGCGATGGGAAACTCAGATATGTAGGGGGAGACACACACATTATATCTATCCGAAAGGATATTTCATGGGAACAGCTTATGAAGAAGACCTTGGGTATTTGCAATCAACCTCACACAATCAAGTACCAGCTTCCAGGGGAGGATCTTGatgctctaatatctgttttctctgatgaagatcttcaaaatatgaaggaggaataccatgggcttgaaaggcatgaaggttctcaaaaacttagaatatttttagttcctttgggtgaatctgaagagacatcatcgacagaggtaagtgctgttcggcagaatgatcctgattaccaatatgttgttgccgtgaatggcatgggagaccctactaggacaaacattggtgggcaaagtttgacaaatgaagccagttcattcgggacagaaccgaatttggctccagttttttcgaaatttccaaatgcttcttctctgttggagatcagggatgctattaatgctttaaatccagatggaattttgaatgattccctgaatttccaaaggcccttgccaattcctcccactccaatccaggtaacaggttctagcacaggttatatacaattgctcggtaacaactcatgccagggaagtattgagagcaatgcatcatttgctactgctcagctacatactgagtactccaatataagaactgcggattgcagataccctcaacaagtggctgctactttgtcaagcgatacccatccttatcagcatggagatgttggttggcccaaaaagctcaatgggcatttggactacaatcctggcaatgaattagtgactcccttatgtgttaatccaagtgatggttacagtgatgaaatttttggtggaaggtccatgcaaaaggaaagaagagtctactctgaaaatcctctttcatgcttggatgatctaatctatcaacagggtgaatcttatggaattacagactcccctcatgggatgccccatgccttatctgatccacagttgaacaagagtggagcaaggtctggttacatctcgcaagatggatttggtcaatctttctccattaaccttgaaaagtgtcaattatcttcgatgttaccccctaaagtctcacaggtgaaccttaaggagaatcagcatgagtccattgtccatcatcctcaaatgcaaagtaagacaccaaaagttgagtcatctgagccacacaaaaggcaagatttggcatcttctccatactatgattcattgggaatgaatgatcctgttcatatgatggatagcattataactgaaaaaaagaaccttattgctcaaactgacttgagtggacccagctatgttgctgaggatattcaggaaaattctgtaaaattagaaaggatgaagttaattgaagaaaagaatccaatttttattgataacaaggttcatgaggtgaaatcagctgtcattgatatgggacatgtgcctgaattgcatcttttggagtccttccctgctaataacttcaatgctatgattaatatgcaaaagaattgggagctaccttctgagggtatagttcctgtttcatcaggcatgatgggcctctctctaaataatctagtgggaaaggcccgatctgatcttgacatgagccaaaggactagtgatcacaaaaaatgtgctttggctgaaggtctgaatggtgaacaagggattgatttttcattgaccagaaattttgatttaaatgctccaattttaaattgtgaagtaggctcttgtgacaaattttctcaaggagatcatatgttcaagcagtccattcacccagattctcttaaagccaaacaaattcatccttgtaagaatcagagggctgcaggttttcaagaaaatcctactgtaagctctgcaagtttgtatccttctgcatttcgtgatgatctcagtccaaatctaaacatgccattgaatgaccaggataattcaagcaatattatgtcttttaaaattgcaccatcttatcttgatgactttattatcagcactggtcaaatggtgagtcagattatccccgaatactctgcctctggaatgtcaaaagttgaagataaaatttcagaacaatcaagaaggtgtaatgatgtaaatcgagtggagccgtttgttgtagtagaagacatgaatggtgttgtttgtccatatatttcagaggatgttggaagtgttgttgtatccctatctcatacagaagctgagagcatcgtccctgagtctgaatctgaggattttaatgacaatcaaacagacaaaaatgaattcctttctgatgcaatgatagcagaaatggaagctagcatttatggtttacagataataaggaatgctgatcttgaagaccttacggagttaggatctggtacttatggaactgtttatcatggaaaatggcggggaacagatgttgctataaagagaattaagaagagctgctttgcagggaggtcttctgagcaagaacggttgGCAAAAGATTTCTGGAGAGAGGCACAAATCCTCTCAAATCTTCACCATCCCAATGTGGTTGCATTTTATGGAATAGTACCGGATGGGGCTGGTGGAACCCTAGCAACTGTAACAGAGTATATGGTTAATGGTTCCCTTAGGCATGTCCTTGTAAAGAACAACAGATTACTAGATCGTCGTAAAAAGCTAATAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCACTCAAAAAATATTGTCCATTTTGATTTGAAATGTGACAATTTACTTGTCAATCTAAGGGATCCACAACGACCCATATGCAAGgttggagattttggattatcaagaattaaacgtaatacccttgtatctggtggtgtgcggggaacccttccatggatggcaccggagctgttgaatgggaatagcagtcgggtttctgaaaaggttgatgttttctcatttggcatctcaatgtgggagctattaacaggagaggaaccttatgcagatatgcattgtggtgccattattgggggtattgtaaagaacactcttagacctcctgtgcctgaacggtgtgattctgaatggaggaagcttatggaagagtgttggtcacctgaccctgaaagccggccatccttcacagagataactagcagtagtgtctttaaagaagcagtcaagattggaattaacatgctttcaggggttgagatcatggtctag 3867 0.1143 MPENKTGNLLGTNTGKDPTMFPKHAQAQPELSSGVSNTGRHVNNNNIAIQAGEEFSTNVGCDGIAAGRVPVSPDIPRYCENVFGLNRENGHVRYEDLTNILGLRRMDSESSSDISDFVAIKQPAQEMENGASANILSKIQKRDGVSRKVFQEPVGVQSSLASAVSPLRRYEASQSNGFSGLGILDDFQSGKMKFLCSFGGKILPRPSDGKLRYVGGDTHIISIRKDISWEQLMKKTLGICNQPHTIKYQLPGEDLDALISVFSDEDLQNMKEEYHGLERHEGSQKLRIFLVPLGESEETSSTEVSAVRQNDPDYQYVVAVNGMGDPTRTNIGGQSLTNEASSFGTEPNLAPVFSKFPNASSLLEIRDAINALNPDGILNDSLNFQRPLPIPPTPIQVTGSSTGYIQLLGNNSCQGSIESNASFATAQLHTEYSNIRTADCRYPQQVAATLSSDTHPYQHGDVGWPKKLNGHLDYNPGNELVTPLCVNPSDGYSDEIFGGRSMQKERRVYSENPLSCLDDLIYQQGESYGITDSPHGMPHALSDPQLNKSGARSGYISQDGFGQSFSINLEKCQLSSMLPPKVSQVNLKENQHESIVHHPQMQSKTPKVESSEPHKRQDLASSPYYDSLGMNDPVHMMDSIITEKKNLIAQTDLSGPSYVAEDIQENSVKLERMKLIEEKNPIFIDNKVHEVKSAVIDMGHVPELHLLESFPANNFNAMINMQKNWELPSEGIVPVSSGMMGLSLNNLVGKARSDLDMSQRTSDHKKCALAEGLNGEQGIDFSLTRNFDLNAPILNCEVGSCDKFSQGDHMFKQSIHPDSLKAKQIHPCKNQRAAGFQENPTVSSASLYPSAFRDDLSPNLNMPLNDQDNSSNIMSFKIAPSYLDDFIISTGQMVSQIIPEYSASGMSKVEDKISEQSRRCNDVNRVEPFVVVEDMNGVVCPYISEDVGSVVVSLSHTEAESIVPESESEDFNDNQTDKNEFLSDAMIAEMEASIYGLQIIRNADLEDLTELGSGTYGTVYHGKWRGTDVAIKRIKKSCFAGRSSEQERLAKDFWREAQILSNLHHPNVVAFYGIVPDGAGGTLATVTEYMVNGSLRHVLVKNNRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPVPERCDSEWRKLMEECWSPDPESRPSFTEITSSSVFKEAVKIGINMLSGVEIMV 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01583 1288 Gene3D - 210 292 - -
Gma18g01583 1288 SMART serkin_6 1005 1270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01583 1288 Pfam PB1 domain 208 292 IPR000270 GO:0005515
Gma18g01583 1288 PRINTS Tyrosine kinase catalytic domain signature 1239 1261 IPR001245 GO:0004672|GO:0006468
Gma18g01583 1288 PRINTS Tyrosine kinase catalytic domain signature 1087 1100 IPR001245 GO:0004672|GO:0006468
Gma18g01583 1288 PRINTS Tyrosine kinase catalytic domain signature 1195 1217 IPR001245 GO:0004672|GO:0006468
Gma18g01583 1288 PRINTS Tyrosine kinase catalytic domain signature 1124 1142 IPR001245 GO:0004672|GO:0006468
Gma18g01583 1288 MobiDBLite consensus disorder prediction 594 625 - -
Gma18g01583 1288 ProSitePatterns Protein kinases ATP-binding region signature. 1011 1036 IPR017441 GO:0005524
Gma18g01583 1288 ProSiteProfiles Protein kinase domain profile. 1005 1270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01583 1288 MobiDBLite consensus disorder prediction 1 15 - -
Gma18g01583 1288 Gene3D Phosphorylase Kinase; domain 1 998 1092 - -
Gma18g01583 1288 Pfam Protein tyrosine and serine/threonine kinase 1008 1266 IPR001245 GO:0004672|GO:0006468
Gma18g01583 1288 Gene3D Transferase(Phosphotransferase) domain 1 1093 1279 - -
Gma18g01583 1288 CDD PB1_UP2 195 290 - -
Gma18g01583 1288 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1130 1142 IPR008271 GO:0004672|GO:0006468
Gma18g01583 1288 SUPERFAMILY Protein kinase-like (PK-like) 993 1269 IPR011009 -
Gma18g01583 1288 SUPERFAMILY CAD & PB1 domains 207 297 - -
Gma18g01583 1288 SMART PB1_new 206 293 IPR000270 GO:0005515
Gma18g01583 1288 CDD STKc_MAP3K-like 1011 1266 - -
Gma18g01583 1288 PANTHER SERINE-THREONINE PROTEIN KINASE 105 1265 - -
Gma18g01583 1288 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 105 1265 - -
Gma18g01583 1288 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01583 Gma-Chr18 44198530 44209004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01583 189 471 MAP Kinase Kinase Kinase AT1G16270 38.870 5.09e-42 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gma18g01583 PK_Tyr_Ser-Thr 1.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01583 - - gmx:100809991 2550.01