Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01562 ATGATTGTAAGCAATAGGAAGAAAGCTAATTTGATGATTGAGTTGCAGCACAAAGGTTTCACTCCCATGCCTAGGAAATGTAAATCTGCAGAACCCCAAGTTGCTGGGGCAAATGAAGATCAAGAAGATGACAACAATACTACAGAGCTGGAGAAGAAATTGTATAAGGAAGTTAAGAAAGTAGCAAAGAAGCCCAACAATAGGAAGAGGATACAACAGCCTGCTATTCATTCTCCCAAGGAATCAGCCCAACCAGTTCAGCCACGGCCAGATAATCATTTTAACAAGGCAAAGGCAACCCCACAAACAGAACCTAAAATAAACAAGGAGGCCAACAAAGATAATGGGAACAACATTGCTGCCCAAACATTCACCTTCAGGGAACTGGCTGCTGTCACAAAGAACTTCAGGCAGGAATGCCTAATAGGTGAAGGTGGTTTTGGAAGAGTTTATAAAGGAAGACTTGAAAAAACCAACCAGGAAGTAGCTGTGAAGCAACTTGACAGGAATGGATTACAAGGGAATAGAGAGTTTCTTGTTGAAGTTTTAATGTTGAGCCTCTTGCACCATCAAAATCTAGTGAATCTAATTGGATATTGTGCTGATGGAGATCAGAGATTATTGGTGTATGAGTACATGCCATTGGGAGCTCTTGAGGATCATCTGCTTGATCTTCAACCACAACAAAAGCCTCTAGATTGGTTCATCAGAATGAAAATAGCTTTGGATGCTGCAAAAGGTCTAGAATATTTGCATGATAAGGCGAATCCTCCGGTCATCTACCGCGACTTAAAATCCTCCAACATCTTGCTGGACAAAGAGTTCAATGCAAAACTCTCTGATTTTGGACTAGCAAAGTTGGGGCCAACAGGGGACAAGTCTCATGTCTCTTCAAGAGTAATGGGTACTTATGGATATTGTGCACCTGAGTATCAAAGAACTGGTCAGCTTACTGTAAAATCAGATGTGTACAGCTTTGGAGTTGTTTTGCTTGAATTGATCACTGGAAGGAGAGCCATTGATAACACAAGACCAACCCGGGAGCAAAATCTAGTTTCTTGGGCATATCCAGTATTCAAGGACCCTCACAGATACCCAGAATTAGCAGACCCCCATCTTCAAGGAAACTTCCCAATGAGATCATTGCATCAAGCAGTGGCAGTAGCAGCCATGTGCCTCAATGAGGAGCCATCAGTGAGGCCCTTGGTCAGTGATATTGTCACTGCTCTTACTTTCCTTGGAACAGCTCCAGGGAGCCAAGACCTCACAGGAATTGCACCTGTTGACATGTCCTCATCACCACAAGAAGCCAATAATAGTGCCCCTTTGAATCTTCTTGACGATGATATCTTCATGGATCGCCAAAGGGCTGTTGCTGAAGCCATTGAATGGGGTACAAACACTAGGAGCAAAGCACCACTACGTGACAGTCCCACCTCTCTGTAA 1446 0.4336 MIVSNRKKANLMIELQHKGFTPMPRKCKSAEPQVAGANEDQEDDNNTTELEKKLYKEVKKVAKKPNNRKRIQQPAIHSPKESAQPVQPRPDNHFNKAKATPQTEPKINKEANKDNGNNIAAQTFTFRELAAVTKNFRQECLIGEGGFGRVYKGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGALEDHLLDLQPQQKPLDWFIRMKIALDAAKGLEYLHDKANPPVIYRDLKSSNILLDKEFNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGRRAIDNTRPTREQNLVSWAYPVFKDPHRYPELADPHLQGNFPMRSLHQAVAVAAMCLNEEPSVRPLVSDIVTALTFLGTAPGSQDLTGIAPVDMSSSPQEANNSAPLNLLDDDIFMDRQRAVAEAIEWGTNTRSKAPLRDSPTSL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01562 481 Pfam Protein kinase domain 138 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01562 481 MobiDBLite consensus disorder prediction 96 115 - -
Gma18g01562 481 Gene3D Topoisomerase, domain 3 1 80 IPR013757 GO:0003677|GO:0003918|GO:0005524
Gma18g01562 481 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED 81 471 - -
Gma18g01562 481 MobiDBLite consensus disorder prediction 61 115 - -
Gma18g01562 481 SMART serkin_6 136 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01562 481 PANTHER OS07G0668900 PROTEIN 81 471 - -
Gma18g01562 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Gma18g01562 481 CDD STKc_IRAK 142 411 - -
Gma18g01562 481 MobiDBLite consensus disorder prediction 22 48 - -
Gma18g01562 481 ProSiteProfiles Protein kinase domain profile. 136 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01562 481 Gene3D Transferase(Phosphotransferase) domain 1 213 419 - -
Gma18g01562 481 ProSitePatterns Protein kinases ATP-binding region signature. 142 165 IPR017441 GO:0005524
Gma18g01562 481 Gene3D Phosphorylase Kinase; domain 1 106 212 - -
Gma18g01562 481 SUPERFAMILY Protein kinase-like (PK-like) 122 423 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01562 Gma-Chr18 43311777 43321553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01562 55 472 Glycoside Hydrolase AT3G07070 66.348 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma18g01562 Pkinase 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01562 - - gmx:100798806 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01562 18 43311777 43321553 Gma08g03264 08 49399817 49402854 GST