Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01561 ATGGTTGGTGGGTTGATTGGCCGATGTGTCTCAAACATATCAAGGATCAGAAATGAGTTTGGAGCAATGATTAAGGACATTGACACAAACACCAAAATGTGGTCTATAATAGCCCAACAACTTCTTGGGAGAACAGACACTGATGTAAAGAACTATTGGAACACAAAGCTGAAAAAGAAGCTCTCTCAATTGGGGATTGACCTTGTCACCCACAAGCCCTTCTCTAAACTCATTGCTGACTATGGAAACATTGGGGGTTGCCAGAAACCAAGTACTCGAATTGCTTCAATCAATAAGGACTTCAAGAATGCAATGATGCTAAAATCAGAATCCCATCAAGCCCTGCCAGAGGGATTTATTACAAACATCAATGACCAACCAAAGCCACCACCCAAAATGGAAACCACTGGAAACAACTTTTTGTTCAATAGAATTCATGGTGATGACCTCTTAATGAATCTTGACCAGTTCCAAGCCATATCAATGAAGTCGGAGGCTAACATGGAGGAGGTTGAGCAAGCTAATAGAGTAGCTGTTGAAAGTTGCCATAGGGTTCTGAGTTTGTTGTCTCAACCAAGGGATCAGGTTCAGCGTAGGAATTTAATGGTGGAAACCAGTGAAACTGTGGTGAGGTTCAAGAAGGTTGTTTCCATGCTTCACAATGGTTTGGGTCATGCAAGAGTGAGGAAACTTAAAAACCCTCAAATCCCCTCTTCCCACCAAAGCATCTTCTTAGACAACCCCAATTGCAAAACCTTAACCAACAACAACAACAACAACAACCATCACTCAAAAAAAAATCTATACTTTCCCCAAATCAACTGA 825 0.4133 MVGGLIGRCVSNISRIRNEFGAMIKDIDTNTKMWSIIAQQLLGRTDTDVKNYWNTKLKKKLSQLGIDLVTHKPFSKLIADYGNIGGCQKPSTRIASINKDFKNAMMLKSESHQALPEGFITNINDQPKPPPKMETTGNNFLFNRIHGDDLLMNLDQFQAISMKSEANMEEVEQANRVAVESCHRVLSLLSQPRDQVQRRNLMVETSETVVRFKKVVSMLHNGLGHARVRKLKNPQIPSSHQSIFLDNPNCKTLTNNNNNNNHHSKKNLYFPQIN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01561 274 CDD SANT 34 57 IPR001005 -
Gma18g01561 274 PANTHER F14D16.11-RELATED 34 252 - -
Gma18g01561 274 Coils Coil 154 174 - -
Gma18g01561 274 SUPERFAMILY Homeodomain-like 23 64 IPR009057 -
Gma18g01561 274 Gene3D - 17 72 - -
Gma18g01561 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 61 IPR017930 -
Gma18g01561 274 ProSiteProfiles Myb-like domain profile. 13 57 IPR001005 -
Gma18g01561 274 MobiDBLite consensus disorder prediction 255 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01561 Gma-Chr18 43301690 43305318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01561 34 80 MYB Transcription Factor Family AT5G56110 78.723 4.47e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01561 K09422 - gmx:100795381 259.225