Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01560 ATGGTTTGGAGGTTCTTGATTACCCTTGCTGATGTTCTTGGAATATGGCCATTTACCTTGGATGAACTTATACAAGCTTTTCATTATCGTGGATGGTGCACAGGCAATGTGGAAGGCCTTTTGAGGCAAAAATTTATGAACAACTGGACAAGGATGTTTCAAGGACTCTGCATGAATATCAATTTATTCCAGAGAAGCCCTCTGTTAGAAATGAGACATATGAGAGAGTTGCACCCTCTATCCACTATAGTTCTCTTGATGGTGTTCCAGATTCTAGGACTTTATTATCTAATGGACgatcttttctcaatggaaatgaatctgcaccttatggatacggaattcgagCAAGGTAGGCAGAATCATCTTTTGCCATCTGCTTCAGGAGAGAATGACGGTGTTCCACGAAAGAACCCATTTGTTGATGTAACTGCTGACATTCATAATAGATGA 453 0.3576 MVWRFLITLADVLGIWPFTLDELIQAFHYRGWCTGNVEGLLRQKFMNNWTRMFQGLCMNINLFQRSPLLEMRHMRELHPLSTIVLLMVFQILGLYYLMDDLFSMEMNLHLMDTEFEQGRQNHLLPSASGENDGVPRKNPFVDVTADIHNR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01560 150 MobiDBLite consensus disorder prediction 123 150 - -
Gma18g01560 150 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 28 - -
Gma18g01560 150 Pfam DDT domain 1 29 IPR018501 -
Gma18g01560 150 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 28 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01560 Gma-Chr18 43222444 43225611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01560 1 28 Homeobox Transcription Factor Family AT5G44180 85.714 5.63e-12 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Gma18g01560 DDT 1.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01560 - - gmx:100797480 72.7886