Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01558 ATGATCAGAGGAACCAGAGGGTATATGGCACCTGAGTGGATTTACACTTTACCAATCACCTCAAAGGTTGATGTTTCCAGCTTTGGAATTGTTCTCTTGGAGATGATAACTGGAAAAAGTCCAACAATGGACATTGAAACGGTTGATGGAACAGAGCCACACGATGGTAGGCTGGTAACATGGGTGAGAGAGAAAAAGAGGAGAACATCTTGGATAGAGCAAATATTAGATCCTTCAATTGAACCAAGTTGTGATGTGAATAAGATGGAAATTTTGGCTACAGTTGCTTTCGACTGTGTTGAGGAAGACAAAGATGTTAGGCCTACCATGAAGCAAGTGATTGAGATGCTTCAAAGCTATGAAAGTGATGCATAA 375 0.408 MIRGTRGYMAPEWIYTLPITSKVDVSSFGIVLLEMITGKSPTMDIETVDGTEPHDGRLVTWVREKKRRTSWIEQILDPSIEPSCDVNKMEILATVAFDCVEEDKDVRPTMKQVIEMLQSYESDA 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01558 124 Gene3D Transferase(Phosphotransferase) domain 1 1 124 - -
Gma18g01558 124 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 122 - -
Gma18g01558 124 ProSiteProfiles Protein kinase domain profile. 1 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01558 124 SUPERFAMILY Protein kinase-like (PK-like) 2 119 IPR011009 -
Gma18g01558 124 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 1 122 - -
Gma18g01558 124 Pfam Protein kinase domain 3 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01558 Gma-Chr18 43208875 43209249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01558 1 117 Receptor kinase-like Gene Family AT1G08590 35.294 8.59e-20 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma18g01558 Pkinase 5.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01558 - - ccaj:109812862 209.149