Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01536 atgttgcataagaagaagaatggcagtgaaaacggcaacaacaaggagaacgaagacaccaccatcacTGATGTCTTGAAGGTCGAAGCGCACTACGAAGGTTGCGCTCCCCTTTGTGGCATAGAAAGCTTTTATTTTGATGATAAGTTTAGATATCCTGAGAATTCTGCTCCTGGTCAACTCCCAAGAACAGTGGATGTAATTGCAGAAGACGACCTTATTGATTCTTGCAAGCCTGGAGATCGAGTGGCAATTGTGGGGATATATAAGGCTCTTGCAAGGAAAAGGCAATGTGAATGGACCAACAATGTTTCTCTTCTCAACAAAGAGGATAATGCACCAATCTACAGTGCTGAAGATGTCAAAAACATTAAAGAGATAGCTGCAAGAGATGATGCATTTGATCTGCTAAGTAATTCACTTGCACCTTCTATATATGGGCATTCTAGGATAAAGAAAGCAGTGGTTTTGTTGATGCTTAGTGGGGTGGAGAAGAATTTAAAGAATGGCACCCACTTGCGAGGGTTAGAGTTTTCTCTTGATCTCCTTTCTTTACTCAATCCCACAGAAATTTTAGGGAACATTGTGGTTGAACATGATTATGCTGAGTGCACTGGATCTGTTATTCAAGCTTTAGTTTTGTTTAAGAAGCTATATCCAAGGCATAGGGAGACAGAGATAAAGAATTTCATTGCCAATGCAGTTCATGGTATGGAAGTTGGGGAGTTTGCTACATTTATGGCACTTGGTTTGCACTTCGTGGTCTTGCAGCGGCGAGTAAAACTTACACTAATTGTGCTGCCATTCGCAAAACCGTTAAATTTCTACTTTCAACACTGA 840 0.3738 MLHKKKNGSENGNNKENEDTTITDVLKVEAHYEGCAPLCGIESFYFDDKFRYPENSAPGQLPRTVDVIAEDDLIDSCKPGDRVAIVGIYKALARKRQCEWTNNVSLLNKEDNAPIYSAEDVKNIKEIAARDDAFDLLSNSLAPSIYGHSRIKKAVVLLMLSGVEKNLKNGTHLRGLEFSLDLLSLLNPTEILGNIVVEHDYAECTGSVIQALVLFKKLYPRHRETEIKNFIANAVHGMEVGEFATFMALGLHFVVLQRRVKLTLIVLPFAKPLNFYFQH 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01536 279 Gene3D - 50 112 IPR012340 -
Gma18g01536 279 Gene3D - 115 176 IPR027417 -
Gma18g01536 279 PANTHER DNA HELICASE 52 175 - -
Gma18g01536 279 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 52 175 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma18g01536 279 SUPERFAMILY Nucleic acid-binding proteins 53 95 IPR012340 -
Gma18g01536 279 Pfam MCM P-loop domain 120 175 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma18g01536 279 Pfam MCM OB domain 53 91 IPR033762 -
Gma18g01536 279 ProSiteProfiles MCM family domain profile. 133 175 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gma18g01536 279 SMART mcm 14 272 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gma18g01536 279 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 180 235 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01536 Gma-Chr18 42321347 42323590 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01536 53 175 Core DNA Replication Machinery Family AT5G46280 71.970 1.32e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01536 K02541 - gmx:100811545 207.223