Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01515 ATGGAAGCACACACCTCAACAATGATAGCAACATCTGATAGAGAAGTCTGGTTTTTTGTCAAGGACAAGAAATATGATAACGTCAACAATGCCCCAGCATTCTTAGGCAGATTCCTGAACAATCTGCATTTTGCAAAAGGATTCAATATTGAGGCTACATGGAAAATAGATAAGAGAAATATATGTCAAATATTTGTTGTAACACTTATCATAGGCAGCCAAGTGAAAGGCAACAAAAGGAGCCTTAGGAACTACAGCTTGCAAGGACCAATTCCTGATTTCAGCAGGATACCACATCTTGCTTATCTTGACCTCAGTTTCAATCAGTTGAATGAATCAATTCCTACTAATAAGCTTTCCGACAATATCACAACCATTGACTTATCAAACAACAAGCTTACTGGAACAATTCCATCCAACTTTTCTGGTCTTCCACGTCTTCAGAAATTGGACATGCAAAATAATCAGCTAACAATCATATCAGGCACTACAAATCTTCCTCCAAGCGTCACACTCTTTACAAGTGAGGTTAATCGGATCAGAAACTTGTTCAGAGACTGGGGCATTTTGAGCAGTGACTTGTTTGGGCCTTATGAACTTCTGGACTTCATTGTGGGTCCTTACAGGGATGCTCCGTTGAGGTCCATTTCATTTGATTACAATGAAATGGCTTTGGCTTCAAATAATTTTAGCAAGTCTGCTCAAATTAGAGAAGGGGGCTATGGGAAGGTTTATAAAGGTCATCTTCCTGATGGCACTGTTGTTGCCGTAAAACGTGCACAGGAGGGTTCACTGCAAGGTGAGAGGGAGTTCATTACAGAAATAGAATTGCTATCAAGGCTACATCATCGCAACCTTCTATCTCTTATTGGATACTGTGATCAAGGGGGTGAACAGCTTTCGGATGCAATTGAGAATGCAGGTGCCATCCTAATTCAAGAGGTTGCAAGCAAAATGAATGAGTTAGCTGCTCATGGTAGAAGATGTGAATCGGCGCTTTGGTATTGA 1008 0.4058 MEAHTSTMIATSDREVWFFVKDKKYDNVNNAPAFLGRFLNNLHFAKGFNIEATWKIDKRNICQIFVVTLIIGSQVKGNKRSLRNYSLQGPIPDFSRIPHLAYLDLSFNQLNESIPTNKLSDNITTIDLSNNKLTGTIPSNFSGLPRLQKLDMQNNQLTIISGTTNLPPSVTLFTSEVNRIRNLFRDWGILSSDLFGPYELLDFIVGPYRDAPLRSISFDYNEMALASNNFSKSAQIREGGYGKVYKGHLPDGTVVAVKRAQEGSLQGEREFITEIELLSRLHHRNLLSLIGYCDQGGEQLSDAIENAGAILIQEVASKMNELAAHGRRCESALWY 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01515 335 ProSiteProfiles Leucine-rich repeat profile. 146 167 IPR001611 GO:0005515
Gma18g01515 335 Pfam Protein tyrosine and serine/threonine kinase 233 298 IPR001245 GO:0004672|GO:0006468
Gma18g01515 335 PRINTS Leucine-rich repeat signature 123 136 - -
Gma18g01515 335 PRINTS Leucine-rich repeat signature 144 157 - -
Gma18g01515 335 SUPERFAMILY L domain-like 81 186 - -
Gma18g01515 335 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 172 211 - -
Gma18g01515 335 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 217 300 - -
Gma18g01515 335 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 172 211 - -
Gma18g01515 335 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 217 300 - -
Gma18g01515 335 Gene3D Ribonuclease Inhibitor 33 186 IPR032675 -
Gma18g01515 335 Gene3D Phosphorylase Kinase; domain 1 210 301 - -
Gma18g01515 335 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 79 159 - -
Gma18g01515 335 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 79 159 - -
Gma18g01515 335 SUPERFAMILY Protein kinase-like (PK-like) 215 297 IPR011009 -
Gma18g01515 335 Pfam Leucine rich repeat 122 162 IPR001611 GO:0005515
Gma18g01515 335 ProSiteProfiles Protein kinase domain profile. 230 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01515 Gma-Chr18 41277253 41285387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01515 218 300 Receptor kinase-like Gene Family AT5G37450 68.675 1.70e-33 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gma18g01515 PK_Tyr_Ser-Thr 4.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01515 - - gmx:100801035 178.718