Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01505 ATGTCAGCTTCCGATAACAGCCGAGCCCGAGAGCTAGCCGGCTTGACCCTTGACGACGTGTTAGGGAACCAGAAGAAGTTTTCATCAACGCCACCCAGCCAACAACTTCCCAAGAGCCGAACCCTACTTGACATCATCAAAGAAGACGAGAGCAACAAGAAGGACCGCAGATCTTGGAAAGCCTTCAAGGACAAGCTTCGGCTGAAGCGCGCAGGCTCAGCTTGGACATCGTCAATTCATATCCCGACCTCGGATGTCCCTATCCCTAACCCGAATAGCCGAACCTTCACCCAGTTTGGTCGCCGCAACTCGGTCCGATCCCCGACTCAGACTCAGACTCACTCCGACTCGGACATGTCAACTCCCTACAATGCTCACCAAGTCGAAGACCTCGACCCCGCCGACGACGACTCCGGTTCTCCGACCACCGGGCCTCCCGCCGTCCGCCCCCAATTCAGCCGCCACGGCTCCACCCGCTTTGCCGGCGACGCCTCCGGCGACAACACCGCCGGCACGCTCCGGCCGCAGCTCTCGCGGCGGAACTCCACCAACATTTCGTCGGAGCCCTACAAGCGGGGCCGCGTGGTGACGTTCCGGGACAGCTTTGACGACGAAGAGGCCGACGGCGAGGACGGCAAGAAGCCCGGGGAGGGGAGGGCGCTGTCGGCGAGGGAggcggtggcagcgcaggaggcggcggaggcggcggcgcaggaagcggaggcggcggagcaggCGCCGGTGACGATGTCCCTGATGGACTTGCTGGAGGAAACTGACAGGGAGATGGGGCTCGAAGGATCGAGGTATATATTGAGTGATGATGAGGACTTTGATGAGGATGAAGACGAAGATGATGATGGCGGAGAGGGTTCTATGGAGCACACTTGCTGTGTTTGCATGGTGAAGCATAAGGCTGCTGCTTTTATACCTTGTGGCCACACTTTCTGCAGGATGTGCTCAAGGGAGCTTATGGTTAGTAGGGGAAATTGCCCTCTCTGCAACAATTTCATTTTGGAGATTCTTGACATTTTCTGA 1038 0.5395 MSASDNSRARELAGLTLDDVLGNQKKFSSTPPSQQLPKSRTLLDIIKEDESNKKDRRSWKAFKDKLRLKRAGSAWTSSIHIPTSDVPIPNPNSRTFTQFGRRNSVRSPTQTQTHSDSDMSTPYNAHQVEDLDPADDDSGSPTTGPPAVRPQFSRHGSTRFAGDASGDNTAGTLRPQLSRRNSTNISSEPYKRGRVVTFRDSFDDEEADGEDGKKPGEGRALSAREAVAAQEAAEAAAQEAEAAEQAPVTMSLMDLLEETDREMGLEGSRYILSDDEDFDEDEDEDDDGGEGSMEHTCCVCMVKHKAAAFIPCGHTFCRMCSRELMVSRGNCPLCNNFILEILDIF 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01505 345 MobiDBLite consensus disorder prediction 79 124 - -
Gma18g01505 345 Coils Coil 223 246 - -
Gma18g01505 345 CDD RING-HC 297 334 - -
Gma18g01505 345 PANTHER OS01G0917900 PROTEIN 6 345 - -
Gma18g01505 345 ProSiteProfiles Zinc finger RING-type profile. 297 335 IPR001841 -
Gma18g01505 345 MobiDBLite consensus disorder prediction 22 40 - -
Gma18g01505 345 Pfam Zinc finger, C3HC4 type (RING finger) 294 338 - -
Gma18g01505 345 SMART ring_2 297 334 IPR001841 -
Gma18g01505 345 SUPERFAMILY RING/U-box 296 341 - -
Gma18g01505 345 PANTHER OS01G0917900 PROTEIN 6 345 - -
Gma18g01505 345 MobiDBLite consensus disorder prediction 271 290 - -
Gma18g01505 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 273 345 IPR013083 -
Gma18g01505 345 MobiDBLite consensus disorder prediction 162 190 - -
Gma18g01505 345 MobiDBLite consensus disorder prediction 273 290 - -
Gma18g01505 345 MobiDBLite consensus disorder prediction 193 220 - -
Gma18g01505 345 MobiDBLite consensus disorder prediction 79 222 - -
Gma18g01505 345 MobiDBLite consensus disorder prediction 20 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01505 Gma-Chr18 40816548 40818526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01505 6 345 C3H Transcription Factor Family AT3G07120 35.340 5.82e-60 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01505 - - gmx:100795449 619.002