Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01443 ATGGGTATTTCTAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCATGGAGAAAGAAGAGAAAGTATGAGCTTGGGCGTCAGGCCGCAAACACCAAGTTATCAAGCAACAAAACTATCCGGAGGATTCGTGTTCGAGGTGGCAATGTTAAATGGAGGGCATTGAGGTTGGATACCGGCAATTACTCATGGGGTAGTGAAGCAGTTACTCGCAAGACTCGTATTCTAGATGTTGTTTACAATGCCTCAAACAATGAGCTTGTGCGAACTCAGACCCTGGTCAAGAATGCTATTGTTCAGGTTGATGCTGCTCCTTTCAAGCAGTGGTACCTTCAGCACTATGGTGTTGAAATTGGTAGAAAAAAGAAAGTGGCATCCAAGAAGGACTCTACTGAGGAGGGTGAGGCTGCTGCTGAAGAAACTAAGAAAAGTAACCATGTCCAGAGAAAACTTGAGAAACGCCAGAAAGATCGGAAACTTGACTCCCACATTGAAGAGCAATTTGGTGGTGGCCGATTGTTGGCCTGTATTTCTTCTCGTCCTGGACAATGTGGCAGGGCTGATGGGTACATTCTGGAAGGGGCGCATTTATAG 606 0.467 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQAANTKLSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKNAIVQVDAAPFKQWYLQHYGVEIGRKKKVASKKDSTEEGEAAAEETKKSNHVQRKLEKRQKDRKLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGAHL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01443 201 MobiDBLite consensus disorder prediction 1 25 - -
Gma18g01443 201 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Gma18g01443 201 MobiDBLite consensus disorder prediction 11 25 - -
Gma18g01443 201 MobiDBLite consensus disorder prediction 127 166 - -
Gma18g01443 201 Coils Coil 201 201 - -
Gma18g01443 201 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Gma18g01443 201 Gene3D - 32 160 - -
Gma18g01443 201 Gene3D - 161 201 - -
Gma18g01443 201 CDD Ribosomal_S8e_like 5 196 - -
Gma18g01443 201 PANTHER 40S RIBOSOMAL PROTEIN S8 1 200 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gma18g01443 201 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gma18g01443 201 PANTHER 40S RIBOSOMAL PROTEIN S8 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01443 Gma-Chr18 36973308 36977019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01443 1 201 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.168 8.15e-120 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01443 K02995 - gmx:100500112 385.571