Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01442 ATGTTCTTATGTAGAGGTTATTTATATGCAAAAAACTTTATTGTCTGGAGAAAGGCTGGAAAAGGTGGAGAACTGACACATGATGAAACCACAATCATTGCTGGAGCGCTTGAACTCTCTGAGAAGACATCCAGTGATGCCATGACTCCCATAACTGATATATTTTCCATTGATATTAATGCAAAGCTTGATAGGGATTTGATGAATCTAATATTGGAGAAAGGGCATAGCAGAGTTCCTGTCTATTATGAGCAGCCTACAAATATTATTGGACTTGTTCTGGTCAAGAATTTATTGACAATTGACCCAGAAGAAGAAATACCCGTGAAAAATGTGACCATCCAAAGAATTCCAAGGGTTCCAGAAACGTTGCCACTTTATGATATTTTGAATGAGTTCCAAAAGAGCCATAGCCACATGGTTGTTGTTGTCAGACATTGTGAGAAGACAAGGCAACAGTCTTCCAACAATAATGCCGATGTGAGAGATGTAAAGGTAGATATTGATGGTGGGCTAAGAAGAGATGCTGAAAGCAAGGAGCAAAAGTTGGTTGAACAATGGGCTGCAAAACACTTGCAACTTACTAAGTTTCTAGAACAGGCTGTGGTGAACGAAGATTCTACTGGGGATGTAATTGCTTTACAACATCAAATTCGACTTTTGAAGGAAGAGCTTTCTATCCTCAAACGACGTCAGAATGTCTCTAGGTCTTTGTCATTTTCTTTGTCATCGATCAGAGATATAAAACAATCACTAGAACTCGAAGACTGTTGCCTAGAAAATGCAACTGACATGGTTGACCAACATGAAGATAACATGCCGGATTATGAATCCAAGGGCATCAGAATGTCCCACAAACAGGTATAG 867 0.3922 MFLCRGYLYAKNFIVWRKAGKGGELTHDETTIIAGALELSEKTSSDAMTPITDIFSIDINAKLDRDLMNLILEKGHSRVPVYYEQPTNIIGLVLVKNLLTIDPEEEIPVKNVTIQRIPRVPETLPLYDILNEFQKSHSHMVVVVRHCEKTRQQSSNNNADVRDVKVDIDGGLRRDAESKEQKLVEQWAAKHLQLTKFLEQAVVNEDSTGDVIALQHQIRLLKEELSILKRRQNVSRSLSFSLSSIRDIKQSLELEDCCLENATDMVDQHEDNMPDYESKGIRMSHKQV 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01442 288 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 17 184 IPR045095 GO:0010960
Gma18g01442 288 PANTHER AND COBALT EFFLUX PROTEIN CORC, PUTATIVE-RELATED 17 184 - -
Gma18g01442 288 Gene3D - 27 162 IPR046342 -
Gma18g01442 288 SUPERFAMILY CBS-domain pair 32 145 IPR046342 -
Gma18g01442 288 ProSiteProfiles CBS domain profile. 48 109 IPR000644 -
Gma18g01442 288 Coils Coil 259 279 - -
Gma18g01442 288 Coils Coil 211 231 - -
Gma18g01442 288 CDD CBS_pair_CorC_HlyC_assoc 45 144 IPR044751 -
Gma18g01442 288 MobiDBLite consensus disorder prediction 269 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01442 Gma-Chr18 36959891 36962974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01442 171 202 MYB Transcription Factor Family AT2G37630 65.625 7.16e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01442 K16302 - gmx:100795897 293.508