Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01437 ATGTTCACCAAATGTAAATCACAATATTTTATTATACTAGTCAAAGAAAATAAGGATGCAATTGAGCTGGTGCATAAAGCATTTGATGAAATCCTTCTTCCAGAGCCTGAAGACCTCTTTTCTGATGATCAATTCAAATCTGAAGGCATTGATTCAGGTGAGGTACACTTAGAAAAGAGTGAATTTGAGAGAAAAAGGAATACTTCAACATCCACAGAATCTCCAACAGCACAGAGGATGGGGACCAAACCTGACCAAAGAGCACCAAGAAGCTGGAGCAATCTGAAGAAGTTAATCCTCTTGAAAAGGTTTGTGAATGCATTAGAGAAGGTAAGAAACATCAACCCCAAAAGACCAAGACGTTTTCCTTCTGATGCTAACTTAGAAATAGAAAAAGTTTTTCTCAAGCACCAAACAGCGGGAGAGAAGAATAATGCTGAGGAATGGATGCTTGACTATGCACTTCAAAAGGTTGTTTCTAAACTTGCACCTGCTCAAAGACAAAAAGTGACACTTCTAGTAAAAGCTTTTGAAACAATTTTGCCATTTCAAGTTGCTGAAAATAGTCCACGGTTTTCTCCAACAATGGAACCTCAAGCAAATCCAGTTCAACCCCTTGACAATTCCTCAAATCACAGCGAGGAAGAAACATCATTTTCTCATGATAGCAGTATGGAACTGACAGAAAATACTAGTGATGATCCAATGCCAGAACTGCACAATCATACTACGCTCAAAGAAAGATGTCTTGAGTCTCTTGACTTTCTTGGAACCAAGACAGTCAAGAATATGCCTGCCTTTGGAGCTACTGAAGAAGACTTGAGTGGAAAGCAAAGTTTAGCTGGCAGTTATGATAATGAGGAGAAGATATCAAGTGACAGTGATAATATTTATCTTGGAGAGATCAAAGATACTACCTCAAGTTCCTTAAATGAGCCAGTTGAAATTATAAGAAGCAGTCATGAGGAGGCTCCAACCAATGAAACAGTCAATGATGTTCCAGAAGATTTGCTATCTAGTGTGAATACAGAAAATCCAGATATCAAATCTAAGTCACCTGGAAGAGATGTTGAAACCAAGAATCTGAATGGTGATAATGGTGAAAAAATTTCCATGTCCAAAAGTTTAGTCCTAGAAGGTTTAGTTAGATCACTCAGATCTAATTTGATTGGTTCAGGAGCACCTGTAAACGAACCAACTGCCAACGACAGAAAAGAAGGAATTGAAAATGTTAAACAGGAAACTGAGACTCTTGAAGAGTTCCCTACAAAGGAACAATATGAAACTCATATTAGTGCTGTTGTAGAACCTGAGACCCCTGTAGAGAAACAGAATAGCACAGGATTGTGGTACTTGGTGTATAAGCACATGGTATCAAATATGGATGAAAACAATTCCGAGTCACTAATTGATGGGGCAGATGAAAAAGAGTCAGGGTTTGATGGGAGCAAAACAAGAGGAGCTTTCTTCTCTCATGAAAGTACACCCGTGACTGATCAAGAGATGAAATTTAAGGACCATGTCGTAGCTGATCCAGAAGTTGCACGCCAACAGAATGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATTCTTCCAGATGATCAGGATGACTTATCAGACAAGGAATCACTCACTGACAGCACAATTTCAGACAACTCCAAACAATCCAACAGAACTGAAAGAGTATACAGTGAAGGCCCGAACCAAAAAGAAGAAAAGATGGAATCCGGGAACGGAATGATCCAAAAACAAGAAGAATCAGCACCAAAGGAGCAAAACAAAACAAACCAGAAAATGTCTACAAGCTGGAGCAATCTTAAAAAAGTGATCCTGCTTAGGAGATTCATCAAGTCATTGGAAAAAGTAAGGAAATTCAACCCAAGAGGGCCTAGATATCTACCTCTAGAGCCTGATTCAGAAGCTGAAAAAGTTAACTTAAGGCATCAAGACATGGAAGAACGAAAAGGTACGGAAGAATGGATGTTTGATTATGCACTTCGAAATTTGACACAGTGA 2022 0.3887 MFTKCKSQYFIILVKENKDAIELVHKAFDEILLPEPEDLFSDDQFKSEGIDSGEVHLEKSEFERKRNTSTSTESPTAQRMGTKPDQRAPRSWSNLKKLILLKRFVNALEKVRNINPKRPRRFPSDANLEIEKVFLKHQTAGEKNNAEEWMLDYALQKVVSKLAPAQRQKVTLLVKAFETILPFQVAENSPRFSPTMEPQANPVQPLDNSSNHSEEETSFSHDSSMELTENTSDDPMPELHNHTTLKERCLESLDFLGTKTVKNMPAFGATEEDLSGKQSLAGSYDNEEKISSDSDNIYLGEIKDTTSSSLNEPVEIIRSSHEEAPTNETVNDVPEDLLSSVNTENPDIKSKSPGRDVETKNLNGDNGEKISMSKSLVLEGLVRSLRSNLIGSGAPVNEPTANDRKEGIENVKQETETLEEFPTKEQYETHISAVVEPETPVEKQNSTGLWYLVYKHMVSNMDENNSESLIDGADEKESGFDGSKTRGAFFSHESTPVTDQEMKFKDHVVADPEVARQQNEAIKMVEEAIDSILPDDQDDLSDKESLTDSTISDNSKQSNRTERVYSEGPNQKEEKMESGNGMIQKQEESAPKEQNKTNQKMSTSWSNLKKVILLRRFIKSLEKVRKFNPRGPRYLPLEPDSEAEKVNLRHQDMEERKGTEEWMFDYALRNLTQ 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01437 673 MobiDBLite consensus disorder prediction 190 213 - -
Gma18g01437 673 Pfam Plant calmodulin-binding domain 590 670 IPR012417 GO:0005516
Gma18g01437 673 Pfam Plant calmodulin-binding domain 79 182 IPR012417 GO:0005516
Gma18g01437 673 MobiDBLite consensus disorder prediction 338 368 - -
Gma18g01437 673 MobiDBLite consensus disorder prediction 56 89 - -
Gma18g01437 673 PANTHER CALMODULIN BINDING PROTEIN PICBP 16 670 - -
Gma18g01437 673 MobiDBLite consensus disorder prediction 547 565 - -
Gma18g01437 673 MobiDBLite consensus disorder prediction 566 581 - -
Gma18g01437 673 MobiDBLite consensus disorder prediction 190 237 - -
Gma18g01437 673 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 16 670 IPR044681 GO:0005516
Gma18g01437 673 MobiDBLite consensus disorder prediction 533 603 - -
Gma18g01437 673 MobiDBLite consensus disorder prediction 349 363 - -
Gma18g01437 673 SMART CaM_binding_2 68 182 IPR012417 GO:0005516
Gma18g01437 673 SMART CaM_binding_2 581 673 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01437 Gma-Chr18 36796922 36798943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01437 605 672 Calmodulin-binding Proteins AT5G04020 63.235 5.82e-22 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01437 - - gmx:100788241 1318.91