Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01427 ATGAATATAGGTCTAAAGAGATGTGGAAAAAGTTGCAGATTGAGATGGCTGAACTATCTAAGGCCTAACATTAAGCACGGGGAATTCTCCGATGAGGAAGATAGAATCATTTGCAGCCTTTATGCTATTATTGGAATCAGGTGGTCAATTATAGCTGCTCAGTTGCCAggcaggactgacaatggcaggactgacaatgATATCAACAAGTATTGCAACAACAAACTTAAGAGGAAACTCATGGGGTTGCTTCCTTCATCTCATCAAAGAATAGCACCCTATCAACAATTCTCCTCTCAAAACCCTTCATCATTTCCTTCTCACTCATCACTATCCTCTTCGTGGATATAG 351 0.359 MNIGLKRCGKSCRLRWLNYLRPNIKHGEFSDEEDRIICSLYAIIGIRWSIIAAQLPGRTDNGRTDNDINKYCNNKLKRKLMGLLPSSHQRIAPYQQFSSQNPSSFPSHSSLSSSWI 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01427 116 SMART sant 25 78 IPR001005 -
Gma18g01427 116 CDD SANT 28 61 IPR001005 -
Gma18g01427 116 Pfam Myb-like DNA-binding domain 6 34 - -
Gma18g01427 116 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 80 IPR017930 -
Gma18g01427 116 PANTHER OS09G0431300 PROTEIN 2 100 - -
Gma18g01427 116 SUPERFAMILY Homeodomain-like 6 61 IPR009057 -
Gma18g01427 116 Gene3D - 3 25 - -
Gma18g01427 116 PANTHER OS09G0431300 PROTEIN 2 100 - -
Gma18g01427 116 ProSiteProfiles Myb-like domain profile. 21 61 IPR001005 -
Gma18g01427 116 MobiDBLite consensus disorder prediction 95 116 - -
Gma18g01427 116 Gene3D - 27 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01427 Gma-Chr18 36577189 36578036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01427 3 82 MYB Transcription Factor Family AT5G57620 78.750 6.55e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma18g01427 Myb_DNA-bind_6 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01427 K09422 - gmx:100796382 162.54