Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01421 ATGTTCTTTGATCACATCCAGATATCTAATCTCACTTTGATCAATTCTCTATCTTTGTTTGTCCATCCAATTTACACAAGTGACATTATAATTCAAGGGCTGACCATTCTTGCTCCAATTGATTCTCCAAACACTGATGGAATAGATCTAGGAGTACCATGGACAGAAGAAGAGCACCGAACGTTCCTTGTTGGACTTGAGAAGCTGGGAAAAGGTGATTGGAGGGGTATCTCTAGAAACTATGTGACTTCAAGAACCCCAACCCAAGTCACTAGCCATGCTCAGAAGTACTTTATTCGGCTTGCAACCATGAATAAGAAAAAGAGACGTTCAAGTCTTTTTGACATGGTTGGTAATGACATCACAAATCCAATTAGCAGCTCTAACTGCAAGTCTTCCAAATGTGAAATTGAGGATGATGTGACCTTGTCACTTGTTCAATTACAAGATACTAAATTAGATGAGCAGAAAGATAGTGATAAATATTGTGAAGCTGGACCAGCTGGTGCTGAACATGAAGTTGTGCCTTTGTGGCTTCATCCTCAGATGAAATCTTCAAATAATAATGTTGCAACAGTAGTTCCTGATCTGGAGCTCACTCTTGCAGTCTCCAAGGGCAAGGCTAAGACCCTACTAGGCCTGAACAAACACAAACAAAATCATCCCCAGATTCCTTCCTTCTTGGACCAATTAGCGTGA 699 0.4063 MFFDHIQISNLTLINSLSLFVHPIYTSDIIIQGLTILAPIDSPNTDGIDLGVPWTEEEHRTFLVGLEKLGKGDWRGISRNYVTSRTPTQVTSHAQKYFIRLATMNKKKRRSSLFDMVGNDITNPISSSNCKSSKCEIEDDVTLSLVQLQDTKLDEQKDSDKYCEAGPAGAEHEVVPLWLHPQMKSSNNNVATVVPDLELTLAVSKGKAKTLLGLNKHKQNHPQIPSFLDQLA 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01421 232 Gene3D - 53 104 - -
Gma18g01421 232 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 51 208 - -
Gma18g01421 232 ProSiteProfiles Myb-like domain profile. 53 98 IPR001005 -
Gma18g01421 232 SUPERFAMILY Homeodomain-like 52 102 IPR009057 -
Gma18g01421 232 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 52 100 IPR006447 GO:0003677
Gma18g01421 232 SUPERFAMILY Pectin lyase-like 4 50 IPR011050 -
Gma18g01421 232 ProSiteProfiles SANT domain profile. 49 102 IPR017884 -
Gma18g01421 232 PANTHER TRANSCRIPTION FACTOR KUA1 51 208 - -
Gma18g01421 232 CDD SANT 53 98 IPR001005 -
Gma18g01421 232 SMART sant 50 100 IPR001005 -
Gma18g01421 232 Gene3D - 2 52 IPR012334 -
Gma18g01421 232 Pfam Myb-like DNA-binding domain 53 98 IPR001005 -
Gma18g01421 232 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 102 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01421 Gma-Chr18 35757276 35759970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01421 1 49 Glycoside Hydrolase AT3G61490 61.224 5.08e-14 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma18g01421 Myb_DNA-binding 8.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01421 - - gmx:778053 322.398