Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma18g01412 | ATGGCTGCTACATTTCCTCAACAACTTCTGGTGAAGCCAATCCACTTTTTCAAGATCATAACCGCTCACAATGTTCATGAAGGAAAGCTAATGATCCCAAATAAGTTTGTGAAGAAATATGGAAAACGCTTACAAAATACTCTATTTCTGAAGACTCCAAATGGTGCTGAATGGAAAATGATTTTGAAAAAACGTGACGGTAAAATATGGTTTCAAAAGGGATGGAAAGAGTTTGCAGAGTATCACTCTCTAGCTCATGGCCATCTTTTGGTTTTCAGATGGGATGTAACTTCTCATTTTCAGGTACACATCTTTGATTTGAGTGCCTTAGAGATTGAGTACCCTACCGAAATAATAAAAGGTAAAACAGCCTCCAATAGAAAAGGAAATGAATCTCCAGGTGATGAACATTTGGAGTGTCACAGATCAGGTCAAAAGAGAAAAGTTAACTCAGTTGAATTTCTTCAACAATGTCAAATGAGAAGTCGCAAGTGTGTTAAAGTTGAGAACACGATGATACTGCCAAGGCAGGCTCTGCATCACACTGCCACAAAATGCAAAGGAAAATCGAAGGCTATGGATAACCAAGTTACAGCTCTTGATAGAGCAAGTTCTTTCAAATCTTGTAATCCATTCTTCTTGACCGTCATGCATCGAACCCACATCAGTTCTCACGGTAGTCTGAACTTACCAATGAAGTTCTGTAGGAGTCACCTTGATTTGCACAAGAAGCGGAGACTTATCAGCCTTCAGGTGTTAAGTGGGAGAATTTGGCCTGCAAAGTATCAGATCCATAAACAAAAGACTGCTATAAGATTTAAACTCTCATGGAACGCATTTGTCAAGGACAATAACTTGAAAGTTGGTGATGTTTGCATCTTTGAACTCGTTCATGGAACTAAACTAACCTTCCTGGTTCACATCTTCAGAGAGACAGATAGTTCAAATTGTTCAACGTCTCAAGAATCTGGTCAAATGAGAGCAGCTTGTCAAAGTCAGAGAAAAGAATTGAAAACCATCACTGCTACCAAATAA | 1035 | 0.3884 | MAATFPQQLLVKPIHFFKIITAHNVHEGKLMIPNKFVKKYGKRLQNTLFLKTPNGAEWKMILKKRDGKIWFQKGWKEFAEYHSLAHGHLLVFRWDVTSHFQVHIFDLSALEIEYPTEIIKGKTASNRKGNESPGDEHLECHRSGQKRKVNSVEFLQQCQMRSRKCVKVENTMILPRQALHHTATKCKGKSKAMDNQVTALDRASSFKSCNPFFLTVMHRTHISSHGSLNLPMKFCRSHLDLHKKRRLISLQVLSGRIWPAKYQIHKQKTAIRFKLSWNAFVKDNNLKVGDVCIFELVHGTKLTFLVHIFRETDSSNCSTSQESGQMRAACQSQRKELKTITATK | 344 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma18g01412 | 344 | SUPERFAMILY | DNA-binding pseudobarrel domain | 208 | 312 | IPR015300 | - | |
Gma18g01412 | 344 | PANTHER | TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED | 10 | 311 | - | - | |
Gma18g01412 | 344 | ProSiteProfiles | B3 DNA-binding domain profile. | 15 | 108 | IPR003340 | GO:0003677 | |
Gma18g01412 | 344 | ProSiteProfiles | B3 DNA-binding domain profile. | 213 | 312 | IPR003340 | GO:0003677 | |
Gma18g01412 | 344 | SUPERFAMILY | DNA-binding pseudobarrel domain | 13 | 115 | IPR015300 | - | |
Gma18g01412 | 344 | Gene3D | - | 192 | 314 | IPR015300 | - | |
Gma18g01412 | 344 | MobiDBLite | consensus disorder prediction | 129 | 144 | - | - | |
Gma18g01412 | 344 | MobiDBLite | consensus disorder prediction | 123 | 144 | - | - | |
Gma18g01412 | 344 | Gene3D | - | 11 | 109 | IPR015300 | - | |
Gma18g01412 | 344 | SMART | B3_2 | 16 | 108 | IPR003340 | GO:0003677 | |
Gma18g01412 | 344 | SMART | B3_2 | 213 | 312 | IPR003340 | GO:0003677 | |
Gma18g01412 | 344 | CDD | B3_DNA | 15 | 106 | IPR003340 | GO:0003677 | |
Gma18g01412 | 344 | CDD | B3_DNA | 211 | 310 | IPR003340 | GO:0003677 | |
Gma18g01412 | 344 | Pfam | B3 DNA binding domain | 213 | 311 | IPR003340 | GO:0003677 | |
Gma18g01412 | 344 | Pfam | B3 DNA binding domain | 16 | 106 | IPR003340 | GO:0003677 | |
Gma18g01412 | 344 | PANTHER | B3 DOMAIN-CONTAINING | 10 | 311 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma18g01412 | Gma-Chr18 | 32749803 | 32752314 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma18g01412 | 13 | 330 | B3 DNA Binding Superfamily | AT3G18990 | 27.500 | 2.54e-35 | 130 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Gma18g01412 | B3 | 1.5e-20 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma18g01412 | - | - | gmx:100819782 | 709.138 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma18g01412 | 18 | 32749803 | 32752314 | Gma08g03144 | 08 | 48133939 | 48135408 | GST |