Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01404 ATGACAAATAAAGTTGGGAAGGTAATTTTCCAAAGGGCTGGAGAACTCAATGTGCCAGTGGGCTTCATGTGTATGAAGGGGCTTGATCTGCATATTTCTGAAATTGAGCAATTGTGCACAGAATTCCCATCAACAGTTGTATTGCTTGATCACTTGGGCTTTTGCAAACCACCAATAAATGATGAACAAGGTCTTTCCTTTTCTCAACTTTTAAATTTGTTTAGATTCCCACAAGTACATGTGAAATTTGGTGCCCTTTTCAGAGTGTCAAGAGCACAGTTTCCTTATCTGGATTTGTCTCTTCTCTTATCCCATGTTGTCTCTCACTTTGGTGCTAACCGTGTGATGTGGAGCAGATTTAAAGTGAATCATGGGGAGGACAGCTACACAACTCTTCCAAAACCAATTGACTCCGGTCAAGAGTTGAGAGTGAGGATGTTGTTTGAGTTGTATAAAAGACAATCACGGATTCCTCAAGTTGAGAGGAAACCAGATGTGGCATTTGAAGCGGCAACAAACGTTGATTGCAAGCAACAACAGCATATGATGAAGGACCAAAAAGGAAATGGCTTAGCTCTAGTGGCACCAGCTGGCCAGGCTTCTCTACAGTCTTCTGCTACTAAAGCTCCTGATTGGCTGGAAGCTGCAATCCATGACTCCAAAATGGATTCCATGGAAACTTCAACTAGTTCTTCTAGTGGGAGGCGGAAATGCCATTATCGAGACATATCACAGGCTGCTCCAAGACCTGTGGTGTATGGCCCTCAAAAGCAAAATTTCAACTTCTTGTCCTTGTCAGCAGGAAGAGACATGTTTAAGGACATTGTTGGCAATGCATATTACATTGCACCCGAGGGCTTAAAAAGAAAATACGGACCACAAGTTGACATTTGGAGTATTGGTGTCATCTTATACATTCTTCTATGTGGTGTTCCTCCCTTTTGGCCAGAAGATGCTCTTGAAGTAGCTATTGACCCTGACTACATATTTGATCTAGCAATACAGCTTGGAAAACTAGATGTAGCAAAGAGTATTGCAATAGAATTGCAGAGCGAGCAGCAGTTGGGAGAATTAGCTATGTTTACTAGAAATTAA 1095 0.4183 MTNKVGKVIFQRAGELNVPVGFMCMKGLDLHISEIEQLCTEFPSTVVLLDHLGFCKPPINDEQGLSFSQLLNLFRFPQVHVKFGALFRVSRAQFPYLDLSLLLSHVVSHFGANRVMWSRFKVNHGEDSYTTLPKPIDSGQELRVRMLFELYKRQSRIPQVERKPDVAFEAATNVDCKQQQHMMKDQKGNGLALVAPAGQASLQSSATKAPDWLEAAIHDSKMDSMETSTSSSSGRRKCHYRDISQAAPRPVVYGPQKQNFNFLSLSAGRDMFKDIVGNAYYIAPEGLKRKYGPQVDIWSIGVILYILLCGVPPFWPEDALEVAIDPDYIFDLAIQLGKLDVAKSIAIELQSEQQLGELAMFTRN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01404 364 ProSiteProfiles Protein kinase domain profile. 1 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01404 364 PANTHER 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE 1 118 IPR032465 GO:0016831
Gma18g01404 364 Gene3D - 323 364 - -
Gma18g01404 364 SUPERFAMILY Protein kinase-like (PK-like) 272 322 IPR011009 -
Gma18g01404 364 Pfam Protein kinase domain 272 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01404 364 Gene3D Transferase(Phosphotransferase) domain 1 201 322 - -
Gma18g01404 364 Pfam Amidohydrolase 9 118 IPR006680 GO:0016787
Gma18g01404 364 PANTHER CATALYTIC/ HYDROLASE 1 118 - -
Gma18g01404 364 Gene3D - 3 118 - -
Gma18g01404 364 SUPERFAMILY Metallo-dependent hydrolases 9 117 IPR032466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01404 Gma-Chr18 31385770 31392207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01404 270 317 EF-hand Containing Proteins AT5G12180 83.333 4.21e-22 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma18g01404 Amidohydro_2 4.3e-07 CL0034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01404 - - gmx:100816951 212.231