Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01403 ATGGTTAGCATGGAGAGAAAAACAAAGAATGAAAATGGGTCTATTGGGTTTGGATCCATTTTCATGCATGCCGATGGCAAAGATTTGCTTCTCATGGTTTTAGGTACCATTGGGGCTGTTGGGGAAGGCTTGGCCACCCCTCTAGTGTTGTATATCAGTAGCCGCATGATGAATAACATTGGGAGTTCCTCTAACATGGATGGAAACACTTTCATCCATAACATCAATAAGAATGCAGTGGCTTGGTTATATTTGGCTGGTGCCTCTTTTGCGGTTTGCTTCCTCGAGGGTTATTGTTGGACAAGAACAAGCGAAAGACAAGCAGCGAAAATGAGATGCAGTTATCTGAAAGCAGTGCTCAGACAAGATGTGGCATACTTCGATTTGCAAGTCACAAGCACGTCCGATATCATCACTAGCGTCTCCGGCGACAGCATCGTAATTCAAGATGTTCTTAGTGAAAAGGTAGTTCCGAATTTCTTGATGAACATTTCATTGTTCGTTGGGAGCTACATAGCGGCTTTTGCAATGTTGTGGAGGTTGGCCATTGTGGGGTTTCCTTTCGTGGTTCTTCTTGTGATCCCGGGTTTAATATACGGCAAGACTTTGATTGGCTTGTCTAGTAAAATCAGAGAAGAGTATAACCAAGCTGGGACAGTGGCGGAACAAACAATTTCGTCCATCAGAACCGTTTTTTCATTTGTGGGGGAAAGCAAGACCATGAACGCTTTCTCCAACGCGCTTCAAGGGACGGTTAAGTTGGGCCTGAAACAAGGCTTGACTAAGGGATTAGCCATTGGAAGCAACGGCGTCGTTTTCGGCATTTGGTCCTTCATGTGCTACTACGGTAGCAGACTCGTCATTTATCATGACGCCAAAGGAGGGACAGTTTTTGCAGTCGGAGCAGCAATCGCCGTTGGTGGATTGGCATTAGGGGCGGGTTTATCCAACATGAAGTACTTCTCGGAGGCGGTGGCGGTAGCGGAGCGTATAAAGGAAGTGATCAAGAGGGTTCCCAAGATAGATTCTGACAACAAGGATGGGCAAACCCTGGAAAAATTTTACGGGGAAGTGGAATTTGACCGAGTCGAATTCGCATACCCGTCGAGACCCGAAAGTGCGATTTTGAAAGGGCTGAGCCTGAAGGTTCCAGCAGGGAAGAGAGTGGCGTTGGTGGGGGAGAGTGGCTCAGGGAAATCAACAGTGATAGCTTTATTACAGAGGTTTTATGACCCTGTTGGGGGAGAGGTGCTTCTGGACGGGATGGGCATCCAGAAGCTGCAGGTGAAGTGGGTGAGGTCGCAGATGGGGTTGGTGAGCCAGGAGCCTGCTCTGTTTGCGACCAGCATTAAAGAGAACATACTTTTCGGCAAAGAGGATGCCACGGAGGACCAGGTGGTTGAGGCTGCAAAAGCTGCTCATGCTCATAATTTCATTTCGCTTCTGCCTCACGGTTACCATACACAGGTGGGAGAGAGGGGAATTCAGATGTCAGGGGGACAAAAACAGAGAATAGCAATTGCGAGGGCAATAATTAAGAAACCGCGAATTCTTCTTCTGGACGAAGCAACAAGCGCACTGGACTCAGAGTCAGAGCGACTCGTCCAAGAAGCGTTGGACAATGCAGCCGCGGGTTGCACCGCCATCATCATCGCGCACCGCTTATCCACAATCCAAAACGCAGACCTCATCGCCGTCGTCGGAGGCGGAAAAATCATAGAGATGGGCTCGCACGACGAGCTCATCCAAAACGACACCGGCGCATACGCCTCCACGTTTCGCCTCCAGCAACAAATGGACAAAGAGAAAGTAGAGGAAAGCACGGAAAAAACCGTTACTCCACGGATTATTTTATCAACTACAGACACCGAAAACGTGGGACCTAATTTAATAGGTCCCACGATATTCAGTAATCATGATGATGATGTGGGGGAAGGGAAGAAGGTGGCAGCACCATCAGTCAGGAGACTGATGGCGCTGAGCGTTCCCGAGTGGAAGCATGCCGTTTTGGGGTGTCTGAATGCGATGGTTTTCGGTGCCGTTCAGCCGGTATACGCATTCACGATGGGGTCCACGATACTTTTGTATTTTCACGCGGATCATGAGGAGATAGCGACGAGGACGAGGATCTACTCGTTCGCCTTTCTGGGTCTCTTCGTGGTGTCATTGCTTGCGAATATTGGGCAGCATTATTGCTTCGGCTACATGGGGGAATACTTGACCAAACGGGTCAGAGAGACCGTGCTTGCCAAAATCCTCACTTTCGAAGTTGGGTGGTTTGATTTGGACCAAAACTCTAGTGCCTCCATCTGTTCCAGACTTGCCAAAGATGCTAATGTGGTAAGGTCTCTAGTGGGAGATAGAATGGCATTGCTGGTACAAACATTTTCAGCGGTAATAACAGCCTACACGATGGGTCTTGTCATTTCTTGGAGGCTTTCCATCGTCATGATAGCTGTGCAACCTATCATCATAGCATGCTTTTACACAAGGCGTGTGCTTCTCAAGAGCATGTCCAACAAATCCGTGAAGGCCCAACAACAAAGCAGCAACATAGCTTCTGAAGCAGTTTCGAATCTTAGAACTGTCACAGCTTTTTCTTCTCAAGACAGGATTCTCAAAATGCTTGAAGAGGCCCAACAAGGCCCAAGTCAAGAGAACATAAGACAATCTTGTTTTGCTGGCATTGGGCTTGGATGCTCCCAGGGCCTTGCATCTTGCATTTGGGCCTTGAATTTTTGGTATGGTGGCAAGCTTATCTCATGTGGGTACATCTCAATAAAAACATTCTTGGAGAGCTTCATGGTTTTGGTGAGCACGGGAAGGATCATTGCAGATGCGGGAAGCATGACCACGGATCTCGCTAGAGGTGCTGATGTAGTTGGTGATATTTTTGGGATCATTGATCGTCGTACGAAGATTGAGCCGGATGATCCAAATGGGTACATGCTAGAGAGGTTAATTGGTCAAATAGAGCTTCATGACGTGCATTTTGCGTACCCTGCTAGGCCTAATGTTGCTATCTTTGAAAATTTCTCGATGAAAATTGAGGCAGGGAAATCAACAGCATTGGTGGGGCAAAGTGGGTCCGGGAAATCGACCATCATAGGGCTAATAGAGAGGTTTTATGATCCACTTAAAGGGATGGTGACAATAGATGGCATGAACATAAAATTGTATAACCTAAAGTCACTAAGGAAGCACATAGCACTAGTGAGCCAAGAGCCAACGTTGTTTGGTGGGACCATAAGGGAGAACATTGCATATGGAAGGTGTGAAAGGGTTGATGAGAGTGAGATCATAGAGGCAGCACAAGCGGCGAACGCGCACGATTTCATAGCTAGCTTGAAGGAAGGGTACGAGACATGGTGTGGGGAAAAAGGGGTGCAACTTTCAGGGGGTCAAAAGCAGAGGATAGCAATAGCAAGGGCAATACTGAAAAACCCTAAGGTGTTGTTGTTGGATGAGGCCACAAGCGCATTAGATGGTCAATCAGAGAAGGTGGTGCAAGATACGTTGATGAGGTTGATGATAGGGAGGACCAGCGTGGTAGTGGCACATAGGTTGAGCACCATACACAATTGTGATGTTATTGGTGTGTTGGAAAAGGGGAAGGTGGTGGAGATTGGAACCCATTCGTCCTTGTTGGCCAAAGGACCATGTGGAGCTTATTACTCCTTGGTGAGTCTTCAGACGAGACATGCA 3705 0.4772 MVSMERKTKNENGSIGFGSIFMHADGKDLLLMVLGTIGAVGEGLATPLVLYISSRMMNNIGSSSNMDGNTFIHNINKNAVAWLYLAGASFAVCFLEGYCWTRTSERQAAKMRCSYLKAVLRQDVAYFDLQVTSTSDIITSVSGDSIVIQDVLSEKVVPNFLMNISLFVGSYIAAFAMLWRLAIVGFPFVVLLVIPGLIYGKTLIGLSSKIREEYNQAGTVAEQTISSIRTVFSFVGESKTMNAFSNALQGTVKLGLKQGLTKGLAIGSNGVVFGIWSFMCYYGSRLVIYHDAKGGTVFAVGAAIAVGGLALGAGLSNMKYFSEAVAVAERIKEVIKRVPKIDSDNKDGQTLEKFYGEVEFDRVEFAYPSRPESAILKGLSLKVPAGKRVALVGESGSGKSTVIALLQRFYDPVGGEVLLDGMGIQKLQVKWVRSQMGLVSQEPALFATSIKENILFGKEDATEDQVVEAAKAAHAHNFISLLPHGYHTQVGERGIQMSGGQKQRIAIARAIIKKPRILLLDEATSALDSESERLVQEALDNAAAGCTAIIIAHRLSTIQNADLIAVVGGGKIIEMGSHDELIQNDTGAYASTFRLQQQMDKEKVEESTEKTVTPRIILSTTDTENVGPNLIGPTIFSNHDDDVGEGKKVAAPSVRRLMALSVPEWKHAVLGCLNAMVFGAVQPVYAFTMGSTILLYFHADHEEIATRTRIYSFAFLGLFVVSLLANIGQHYCFGYMGEYLTKRVRETVLAKILTFEVGWFDLDQNSSASICSRLAKDANVVRSLVGDRMALLVQTFSAVITAYTMGLVISWRLSIVMIAVQPIIIACFYTRRVLLKSMSNKSVKAQQQSSNIASEAVSNLRTVTAFSSQDRILKMLEEAQQGPSQENIRQSCFAGIGLGCSQGLASCIWALNFWYGGKLISCGYISIKTFLESFMVLVSTGRIIADAGSMTTDLARGADVVGDIFGIIDRRTKIEPDDPNGYMLERLIGQIELHDVHFAYPARPNVAIFENFSMKIEAGKSTALVGQSGSGKSTIIGLIERFYDPLKGMVTIDGMNIKLYNLKSLRKHIALVSQEPTLFGGTIRENIAYGRCERVDESEIIEAAQAANAHDFIASLKEGYETWCGEKGVQLSGGQKQRIAIARAILKNPKVLLLDEATSALDGQSEKVVQDTLMRLMIGRTSVVVAHRLSTIHNCDVIGVLEKGKVVEIGTHSSLLAKGPCGAYYSLVSLQTRHA 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01403 1235 SUPERFAMILY ABC transporter transmembrane region 652 976 IPR036640 GO:0005524|GO:0016021
Gma18g01403 1235 Gene3D - 348 597 IPR027417 -
Gma18g01403 1235 Pfam ABC transporter 1010 1159 IPR003439 GO:0005524
Gma18g01403 1235 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 991 1228 IPR003439 GO:0005524
Gma18g01403 1235 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 358 594 IPR003439 GO:0005524
Gma18g01403 1235 ProSitePatterns ABC transporters family signature. 497 511 IPR017871 GO:0005524
Gma18g01403 1235 SMART AAA_5 385 579 IPR003593 -
Gma18g01403 1235 SMART AAA_5 1018 1213 IPR003593 -
Gma18g01403 1235 Pfam ABC transporter 376 525 IPR003439 GO:0005524
Gma18g01403 1235 CDD ABC_MTABC3_MDL1_MDL2 991 1231 - -
Gma18g01403 1235 ProSitePatterns ABC transporters family signature. 1131 1145 IPR017871 GO:0005524
Gma18g01403 1235 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 10 1233 - -
Gma18g01403 1235 Pfam ABC transporter transmembrane region 671 938 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma18g01403 1235 Pfam ABC transporter transmembrane region 32 301 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma18g01403 1235 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 33 323 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma18g01403 1235 CDD ABC_MTABC3_MDL1_MDL2 358 596 - -
Gma18g01403 1235 Gene3D ABC transporter type 1, transmembrane domain 20 957 IPR036640 GO:0005524|GO:0016021
Gma18g01403 1235 SUPERFAMILY ABC transporter transmembrane region 27 342 IPR036640 GO:0005524|GO:0016021
Gma18g01403 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 347 596 IPR027417 -
Gma18g01403 1235 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 675 956 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma18g01403 1235 CDD ABC_6TM_Pgp_ABCB1_D1_like 32 331 - -
Gma18g01403 1235 CDD ABC_6TM_Pgp_ABCB1_D2_like 658 974 - -
Gma18g01403 1235 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 10 1233 IPR039421 -
Gma18g01403 1235 Gene3D - 982 1235 IPR027417 -
Gma18g01403 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 980 1231 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01403 Gma-Chr18 31369954 31377984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01403 4 1231 Calmodulin-binding Proteins AT2G36910 43.530 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01403 K05658 - gmx:100791575 2326.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01403 18 31369954 31377984 Gma08g03159 08 48395451 48402249 GST