Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01398 ATGCTTTCTTTCAAAGGGAGTCCATACTGGATGGCACCCGAGGTTGTAATGAATACAAATGGCAATAGTCTTCCTGTTGATATATGGAGTTTGGGATGCACAATTCTTGAAATGGAAACATCAAAGCCTCCTTGGAATCAGTATGAAGGGGTAGCTGCAATATTTAAAATTGGTAACAGCAGAGATATGCCTAAAATTCCTGAGATATGCCTTGGATCTTGGGTTCTTGAGCTCTCGTCTGAACGGCCTCAGAATCTGCTTCCCCAAATTGCCACCCACACCCCTCACTGCTTCTCCCTTCCCCACACCCCTCCCTATCGTTGCCAATAA 330 0.4515 MLSFKGSPYWMAPEVVMNTNGNSLPVDIWSLGCTILEMETSKPPWNQYEGVAAIFKIGNSRDMPKIPEICLGSWVLELSSERPQNLLPQIATHTPHCFSLPHTPPYRCQ 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01398 109 ProSiteProfiles Protein kinase domain profile. 1 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01398 109 Pfam Protein kinase domain 3 64 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01398 109 PANTHER MAP KINASE KINASE KINASE 1 68 - -
Gma18g01398 109 SUPERFAMILY Protein kinase-like (PK-like) 3 70 IPR011009 -
Gma18g01398 109 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 68 - -
Gma18g01398 109 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01398 Gma-Chr18 30396333 30396963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01398 1 68 MAP Kinase Kinase Kinase AT1G53570 80.882 1.43e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma18g01398 Pkinase 2.9e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01398 K04421 - gmx:102660333 234.572