Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01375 ATGAACACACCTCTTAACAGGGATGCAAAGTCGTGCTTGGAAAGGTGGAAGAACTACCTCAAGCCTGACATAAAAAAAGGTTCTCTTACCGAAGAAGAGCAGCGTCTTGTCATCCGCCTTCAAGCAAAATACGGGAACAAATGGAAGAAAATCGCTGCAGAAGTCCCAGGGCGCACTGCTAAGCGGTTAGGCAAGTGGTGGGAAGTCTTCAAAGAGAAGCAGCAGAGAGAGAAAAAGGATGTCAATAGAATCTCCGACCCAATTAACAATAGTAAGTACGAGCACATACTTGAGAGTTTTGCAGAGAAACTAGTGAAGGAACGCCCTTCACCATCATTTTTAATGGCTGCTTCCAATGGGGCATTTCTGCACACCGATACACCAGCACCTGCATCATCCTTGCTTCCTTCTTGGCTTTCTAATTCTAGTAGTCCTGCCGCTGATGGGCCAAGTTCCCTTTCGGTGACACTAAGTCTTTCTTCCTCAATGGTGATCGCGCCTCCATTTTCATGGTTGCCACCCAAGAGAGGACCAGACAATGCTCCTTTTGTTTTGGGGAATGCAGCAGCACTTCAGGGAGTTATTCCAACTCTAAGTGATAACATGCTTATGTCTCAGATGGTGGAGCACCGTAAAGAGTTGGAAGAGGGGCATCGTGCTTTGGGCACACACAAGAAGGAGGCAGCTTGGAGGTTAAGTCGGGTGGAGTTGCAGTTGGAGTCAGAGAAGACAAACCGAAGAAGGGAGAAGATTGAAGAATTTGAAGCAAAAATTAAAGCTCTTCAAGAAGAGGAGCTAGCTGCTTTGGGTAGAATTGAAGCAGAATACAGAGAACAGTTAGATGCATTAAGGAGAGATGCTGAAAACAAGGAGCAAAAGTTGGCAGAACAATGGGCTGCAAAGCATTTGCGGCTTACTAGGTTACTAGAGCAATTAGGGTGCAGAGCAGGGCTCCCTTAG 960 0.4646 MNTPLNRDAKSCLERWKNYLKPDIKKGSLTEEEQRLVIRLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKDVNRISDPINNSKYEHILESFAEKLVKERPSPSFLMAASNGAFLHTDTPAPASSLLPSWLSNSSSPAADGPSSLSVTLSLSSSMVIAPPFSWLPPKRGPDNAPFVLGNAAALQGVIPTLSDNMLMSQMVEHRKELEEGHRALGTHKKEAAWRLSRVELQLESEKTNRRREKIEEFEAKIKALQEEELAALGRIEAEYREQLDALRRDAENKEQKLAEQWAAKHLRLTRLLEQLGCRAGLP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01375 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 75 IPR017930 -
Gma18g01375 319 PANTHER TRANSCRIPTION FACTOR AS1 1 316 IPR031055 GO:0005634|GO:0006351|GO:0010338
Gma18g01375 319 SUPERFAMILY Homeodomain-like 6 74 IPR009057 -
Gma18g01375 319 Pfam Myb-like DNA-binding domain 26 61 IPR001005 -
Gma18g01375 319 Gene3D - 29 94 - -
Gma18g01375 319 SMART sant 25 73 IPR001005 -
Gma18g01375 319 Coils Coil 232 297 - -
Gma18g01375 319 ProSiteProfiles Myb-like domain profile. 21 71 IPR001005 -
Gma18g01375 319 CDD SANT 30 71 IPR001005 -
Gma18g01375 319 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01375 Gma-Chr18 28235314 28236273 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01375 1 319 MYB Transcription Factor Family AT2G37630 59.824 8.78e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma18g01375 Myb_DNA-binding 2.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01375 K09422 - gmx:100809813 596.275