Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01313 ATGGAAGAAGCACTCCGTCGTCTCAACGGAATGGCCCCCACTCAAGTCCCCGACACAACCGTCTCCGACCACCACCCCAAGAAGAGCGCCACCAAGCGCGGGCTGCGCGACAACGCCAGCTCCGGCGGCACCATGCGGTACCGCGGCGTGCGCCGCCGCCCCTGGGGCCGGTACGCCGCCGAGATCCGTGACCCGCAGTCGAAGGAGCGGCGCTGGTTGGGCACCTTCGACACGGCGGAGGAGGCCGCCTGCGCCTACGACTACGCCGCCCGCGCCATGCGCGGCGCCAAGGCCCGCACCAATTTCGTCTACCCCGACGCCGCCGACCCCCACCACCACCTCTTCCAACCCTACAATATCAACCCCAAACACTGCCACGTCACCAGGTGGATCCCCAACCAAAATTTAAGCGCTGACTTCTCCACAAATGGCCACAACAACAACAACCCTTCTTCTTCTTCTTCTTCTCTTAACATGCTTCTCTTTCGTGACTTTCTCAACTCTTCTTCTCACCACTTTCATAACAATAATAATAATAGCAAGTCTTCTAGTTGTTATGTAAACTCTTCATCATCATCTTCTTCTGCCACTAACTGTCTCCAAGGTTGTTGCTTTACCAACGCTAATTTTGGAATGGAAGTTGCTGAAGCTATTGATGAAGAATCGGAGTTTTTCCCGCGAGAGTCTTCGGATTCTGGATTGTTGGAGGAGATTGTCCACAAGTTCTTGCCAAAATCGAAGCCCAAGAATGAAACTTTGTCAGCTCCTGAGATGCTTCCTCAACCGAAATTTGATCACAAGAATGTTTCTGCTGCAAAGGGTTATGCTGATATTAGGACGAGGGTTCCGAAGGTTGAAGCTTTTGGTGTCCCTTATGATTCTTCTCCCGTGCAGCAGCAATTCGAAGCCCTTCATCATGGTTTCAACACCATGCAGGGTGTGGCTATGGAGAGAAACAATCAGTTTGTGATGAACCATGTTGCTGCAGGGTGCTCCAACATGGAAGATTTTCTTCAGTATCCAGAGCTTTTTAATTCTCTTGCAGCCAGGATGCAAAACGCTTAG 1065 0.5211 MEEALRRLNGMAPTQVPDTTVSDHHPKKSATKRGLRDNASSGGTMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTFDTAEEAACAYDYAARAMRGAKARTNFVYPDAADPHHHLFQPYNINPKHCHVTRWIPNQNLSADFSTNGHNNNNPSSSSSSLNMLLFRDFLNSSSHHFHNNNNNSKSSSCYVNSSSSSSSATNCLQGCCFTNANFGMEVAEAIDEESEFFPRESSDSGLLEEIVHKFLPKSKPKNETLSAPEMLPQPKFDHKNVSAAKGYADIRTRVPKVEAFGVPYDSSPVQQQFEALHHGFNTMQGVAMERNNQFVMNHVAAGCSNMEDFLQYPELFNSLAARMQNA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01313 354 Gene3D AP2/ERF domain 45 104 IPR036955 GO:0003700|GO:0006355
Gma18g01313 354 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Gma18g01313 354 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Gma18g01313 354 MobiDBLite consensus disorder prediction 1 48 - -
Gma18g01313 354 Pfam AP2 domain 46 95 IPR001471 GO:0003700|GO:0006355
Gma18g01313 354 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Gma18g01313 354 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Gma18g01313 354 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 216 354 - -
Gma18g01313 354 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 207 - -
Gma18g01313 354 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 216 354 - -
Gma18g01313 354 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 1 207 - -
Gma18g01313 354 CDD AP2 46 102 IPR001471 GO:0003700|GO:0006355
Gma18g01313 354 SUPERFAMILY DNA-binding domain 46 103 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01313 Gma-Chr18 23509594 23510658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01313 1 271 AP2-EREBP Transcription Factor Family AT1G24590 38.435 1.08e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma18g01313 AP2 5.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01313 - - gmx:102661952 637.876