Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01297 ATGAGGTCTAATAAATATAAAGAGTTCTATGCTGAACTCAAGGTCTTGTGTAAAATCCAACACATCAACATTGTGGAGCTGTTGGGATATGCCAACGGAGAAGATGACCTCTGTTTGGTGTATGAGTATGTTCCAAGTGAATCTCTTAGTGATCATCTTCATGATCCATTACATAAAGGATTGCTTTTTATGGGGGATAAATGCCGACTCTTCCACAAAGCACACAGCACCGGCCCTAAAACGTAG 246 0.4065 MRSNKYKEFYAELKVLCKIQHINIVELLGYANGEDDLCLVYEYVPSESLSDHLHDPLHKGLLFMGDKCRLFHKAHSTGPKT 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01297 81 SUPERFAMILY Protein kinase-like (PK-like) 4 59 IPR011009 -
Gma18g01297 81 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 61 IPR044812 GO:0019199|GO:0045087
Gma18g01297 81 ProSiteProfiles Protein kinase domain profile. 1 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01297 81 Gene3D Transferase(Phosphotransferase) domain 1 1 77 - -
Gma18g01297 81 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 1 61 - -
Gma18g01297 81 Pfam Protein tyrosine and serine/threonine kinase 3 56 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01297 Gma-Chr18 22747240 22749699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01297 1 60 Receptor kinase-like Gene Family AT1G51940 58.333 2.34e-18 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma18g01297 PK_Tyr_Ser-Thr 1.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01297 - - ccaj:109807310 110.153