Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01290 ATGGAGGGAGGCGAGGATCTCCACCACCATCACCACCACCACCACCATCAGAACAGCAAAAAGCCTCCGCCAAAGCGCACCTCAACCAAGGACCAACACACGAAGGTGGACGGGCGCGGGCGGCGCATTCGAATGCCGACCCTCTGCGCTACCCGCGTCTTCCAGCTCAACCGCGAGTTGGGCCACAAGTCAGACGACAAAACCATTGAGTGGCTCCTCCAGCAGGTGGAGCCTGCTATGATCGCCACCATTGGCACCGACACCATCCCCGCCAACTTCACCTCCCTGAACATCTCTATACGCAGTTCCGGCTCCTCCATGTTCGTCCCCTCCCAGCTCCGACCCTCCTACTTTAACCCCAATTTCTCCCTCCAACAACATCAACGAAGAACCTTCTTCCTCGACATAGCCTTTTCCTCTGACAATACCAATAACAACACATCAACACTTCTCAATTTCCAATCCAACACCCTCAACACCACCATGCTGCAACAGCAGGCCAAGCCGAAGCTTAGCGATGGCGGCGTGCCATCTTCCTTACATTTCAGACACCATTGTCTAATTTAA 567 0.5467 MEGGEDLHHHHHHHHHQNSKKPPPKRTSTKDQHTKVDGRGRRIRMPTLCATRVFQLNRELGHKSDDKTIEWLLQQVEPAMIATIGTDTIPANFTSLNISIRSSGSSMFVPSQLRPSYFNPNFSLQQHQRRTFFLDIAFSSDNTNNNTSTLLNFQSNTLNTTMLQQQAKPKLSDGGVPSSLHFRHHCLI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01290 188 ProSiteProfiles TCP domain profile. 29 83 IPR017887 -
Gma18g01290 188 MobiDBLite consensus disorder prediction 9 23 - -
Gma18g01290 188 MobiDBLite consensus disorder prediction 1 42 - -
Gma18g01290 188 Pfam TCP family transcription factor 27 156 IPR017887 -
Gma18g01290 188 MobiDBLite consensus disorder prediction 24 42 - -
Gma18g01290 188 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 175 IPR005333 GO:0003700
Gma18g01290 188 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 17 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01290 Gma-Chr18 22535945 22536511 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01290 20 98 TCP Transcription Factor Family AT1G69690 83.544 1.48e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma18g01290 TCP 4.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01290 - - gsj:114397100 325.479