Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01282 ATGTTGAGGTTTTTCTTAAAGCTAGTGAATGTTGTGGACTCACATGTTGTTCCTAGGAAGAAGAGGTTGTGGGTGTTGGTGAGTTCAGTTGTTGGAGGAATTGTTGTTTTGCTTTTTGTTATAGCTGGTTTGCTGCTTTCTCTCAAATGCAGGAAGAAGAAGAAAACGCAACGAACAATGGAAAGTGTAGAATGGACGCTTTTATGTGTGTTCGGAGGGAGTTCACTTAGTAGAATGTCTGAAGGGACAACTTTTGCCTCTCTTGGTTCTTATGGTTATTTTGGCTTGACAATCCCTTTTGCCGATATACAATCAGCAACAAACAATTTTGATAGAAGTCTAATTATAGGGTCTGGTGGGTTTGGTATGGTTTACAAAGGGCTCAAAGACAACGTGAAGGTTGCAGTCAAGAGAGGCATGCCTGGATCCAGACAAGGGCTTCTAGAATTCCAAACCGAAATAACAATCTTTTCCAAAATTTTCCATCGCCATCTTGTTTCACTAGTTGGATATTGTGAAGAAAACTCAGAAATGATACTTGTCTATGAGTATATGGAAAAAGCTAGAGGTCTCCACTATCTACACACTGGTTTGGTGCAAGGAATCATCCACTGTGACATCAAATCAACCAATATTTTTCTCGATGAAAACTATGTGGCCAAGGTTGTAGATTTTGGTCTTTCAAGATCTGGACCTTGTCTCAATGAAATCCATGTGAGCACTGGTGTGAAAGGTAGTTTTGGTTATCTTGATCTGGAGTATTTTCGAAGGCAGCAGCTTACAGATAAGTCAGATGTTTACTCATTTGGGGTGGTGCTTTTTGAGGTTCTTTGTGCCGGACCTGCTATTGATCCACAACTTGATAGGGAATAG 873 0.4032 MLRFFLKLVNVVDSHVVPRKKRLWVLVSSVVGGIVVLLFVIAGLLLSLKCRKKKKTQRTMESVEWTLLCVFGGSSLSRMSEGTTFASLGSYGYFGLTIPFADIQSATNNFDRSLIIGSGGFGMVYKGLKDNVKVAVKRGMPGSRQGLLEFQTEITIFSKIFHRHLVSLVGYCEENSEMILVYEYMEKARGLHYLHTGLVQGIIHCDIKSTNIFLDENYVAKVVDFGLSRSGPCLNEIHVSTGVKGSFGYLDLEYFRRQQLTDKSDVYSFGVVLFEVLCAGPAIDPQLDRE 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01282 290 SUPERFAMILY Protein kinase-like (PK-like) 92 283 IPR011009 -
Gma18g01282 290 Gene3D Transferase(Phosphotransferase) domain 1 182 290 - -
Gma18g01282 290 Gene3D Phosphorylase Kinase; domain 1 76 181 - -
Gma18g01282 290 ProSiteProfiles Protein kinase domain profile. 110 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01282 290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Gma18g01282 290 ProSitePatterns Protein kinases ATP-binding region signature. 116 137 IPR017441 GO:0005524
Gma18g01282 290 SMART serkin_6 110 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01282 290 PANTHER OS07G0166700 PROTEIN 6 187 IPR045272 GO:0004714|GO:0006468
Gma18g01282 290 PANTHER OS07G0166700 PROTEIN 188 290 IPR045272 GO:0004714|GO:0006468
Gma18g01282 290 Pfam Protein tyrosine and serine/threonine kinase 187 281 IPR001245 GO:0004672|GO:0006468
Gma18g01282 290 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 187 - -
Gma18g01282 290 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 188 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01282 Gma-Chr18 22156831 22157787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01282 22 290 Receptor kinase-like Gene Family AT3G46290 53.872 3.13e-97 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gma18g01282 PK_Tyr_Ser-Thr 1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01282 - - gmx:100787484 462.611