Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01279 atgaggCTTTACTCTCGGCCTCTCGGAAGCCCAGCGGTGGGGGCGGCACCTCCATCGTCGCAGCAGCAGGAACTCTGGTTCTTCCTCCGCTTCCACAATGTGCCACGTGTTCACACCCTCGCGCATCTCCCCCAGGTCTTGATTGCAACAAGTAATGCTACAAAGGAGAAGGCACAGGCAACCATTTCTGGTGCCAAGTCCATGAAGGGTACTCCATATTGGATGGCTCCAGAAGTTATTCTCCAAACTGGGCATAGCTTACCCACAACAATCGTGGCCGGAAGGTGCAGAGACAAGGTATATAACTTTGTAAAATTGGCAGAACTTTACTATGTAGGAAGCCATGGCATGGACATCACTGGTCCAACAAAAAGTCCAAAGCAAGAATACCTTGCAAAATCCCTTATGGCCAAGGATCAATTTTTGGATTCTTCAGCCAAGATAATGTACAAGTTAGGGATATCATCATCAAAGATCAACTTGTTGCTTCCCATCCTCATGGAATTTGTTGAGATTACAAGGGAAGGATCTTTGGCACTTGCAGCACTTCCATTTGATGGCATACTTGGACTCGGATTCCAGGATACTTCAGTTAGAAAAGTCACACCAGTGTGGTACACACCAGAACTTCATTAA 636 0.4638 MRLYSRPLGSPAVGAAPPSSQQQELWFFLRFHNVPRVHTLAHLPQVLIATSNATKEKAQATISGAKSMKGTPYWMAPEVILQTGHSLPTTIVAGRCRDKVYNFVKLAELYYVGSHGMDITGPTKSPKQEYLAKSLMAKDQFLDSSAKIMYKLGISSSKINLLLPILMEFVEITREGSLALAALPFDGILGLGFQDTSVRKVTPVWYTPELH 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01279 211 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 86 136 - -
Gma18g01279 211 Pfam Eukaryotic aspartyl protease 167 207 IPR033121 -
Gma18g01279 211 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 86 136 IPR044651 GO:0004805|GO:0005992
Gma18g01279 211 SUPERFAMILY Acid proteases 168 207 IPR021109 -
Gma18g01279 211 Pfam Trehalose-phosphatase 89 133 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01279 Gma-Chr18 22051155 22056179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01279 46 96 MAP Kinase Kinase Kinase AT1G54960 63.462 8.14e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01279 K01087 - gmx:121174956 145.591