LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma18g01278	ATGGATCTAGAACTCCCTGCTCATGCTGCAACTGTGAATGAATCTCAACAACAAAAGTTTGCTCTACCTGTGGATTCTGAAAACAAGGCAACTGTGTTCAGATTATTTTCCTTTGCCAAACCCCACATGAGAGCCTTTCACCTATCATGGGTCTCTTTCTTCGCATGCTTTGTGTCTAGCTTTGCTGCACCACCTCTTCTCCCCATAATCCGCGACAACCTCAACCTCACAGCCACTGACATTGGAAATGCCGGTGTGGCATcagtctcaggtgctgtctttgcaagaattgcaatgggaacagccTGTGACTTGGTCGGACCGCGCCTCGCCTCTGCATCATTAATCCTCCTCACAGCACCATTTGTGTACTTCACTTCCATCATCAACTCAGCCACCTCTTATCTTCTAGTCCGGTTCTTCACCGGCTTCTCCCTCGCCACCTTTGTGTCCACGCAGTTCTGGATGAGCTCCATGTTCTCTGCTCCGGTGGTCGGTTCGGCCAACGGACTCTCCGGTGGATGGGGAAACCTTGGAGGAGGGGCTACCCAGCTCATCATGCCCCTTGTGTTCTCCCTCATCCGCGACATTGGCGCTACCAAATTCACCGCTTGGAGGATTGCATTCTTTGTCCCTGCCATGTTCCAAATGCTCACAGCATTCTCAATTCTGATATTTGGTCAGGACATGCCTGATGGGAACTTCCGCCGCTTGAAGAAGTCAGGGGAAAAAGCCAAAGATGATTTTTCAAGAGTCTTATATCACGGTGTTACAAACTATAGGGGATGGATTCTGGCGTTGACTTATGGATACTGCTTTGGGGTGGAGTTGACCATAGACAACATCATAGCTGAGTACTTCTATGACAGGTTTAATCTGAAACTCCACACTGCTGGAATCATTGCTGCAAGCTTTGGCTTGGCTAACATATTTTCTAGGCCTGGTGGGGGTTATATATCTGATGTAATGGCAAAGAGGTTTGGCATGAGGGGAAGATTGTGGGCTTTATGGATATGCCAAACCTTGGCTGGTGTTTTCTGCATAATTCTTGGCCTGGTGGGATCTCTAAGTGTATCCGTGGTTGTTATGATCATATTCTCTGTGTTCGTCCAAGCCGCGTGTGGAATGACCTTTGGGATTGTTCCTTTTGTCTCCAGAAGGTCATTAGGGGTCATATCTGGAATGACAGGAGGAGGAGGCAATGTGGGTGCAGTTGTGACCCAGTTAATTTTCTTCAAAGGATCCAAGTTTTCAAAAGAAAGAGGAATCACTCTAATGGGAGCCATGATCATAATATGCACCCTGCCAATATGTTTAATCTACTTTCCACAATGGGGTGGCATGTTTTCTGGTCCTTCATCTAAAAAAGTGACAGAAGAAGATTACTACTTGGCTGAGTGGAACTCAAAGGAGAAGGAGAAAGGCTCTCATCATGCAAGCTTGAAATTTGCTGATAACAGCAGAAGTGAAAGGGGCAGAAAACTGAATGCTTCGACCGAGCCTACTGAGGAAATCACACCCCCACATGTTTGA	1533	0.456	MDLELPAHAATVNESQQQKFALPVDSENKATVFRLFSFAKPHMRAFHLSWVSFFACFVSSFAAPPLLPIIRDNLNLTATDIGNAGVASVSGAVFARIAMGTACDLVGPRLASASLILLTAPFVYFTSIINSATSYLLVRFFTGFSLATFVSTQFWMSSMFSAPVVGSANGLSGGWGNLGGGATQLIMPLVFSLIRDIGATKFTAWRIAFFVPAMFQMLTAFSILIFGQDMPDGNFRRLKKSGEKAKDDFSRVLYHGVTNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANIFSRPGGGYISDVMAKRFGMRGRLWALWICQTLAGVFCIILGLVGSLSVSVVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSKFSKERGITLMGAMIIICTLPICLIYFPQWGGMFSGPSSKKVTEEDYYLAEWNSKEKEKGSHHASLKFADNSRSERGRKLNASTEPTEEITPPHV	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma18g01278	510	Pfam	Major Facilitator Superfamily	50	406	IPR011701	GO:0022857\|GO:0055085
	Gma18g01278	510	MobiDBLite	consensus disorder prediction	470	498	-	-
	Gma18g01278	510	PANTHER	HIGH-AFFINITY NITRATE TRANSPORTER 2.3	10	496	IPR044772	GO:0015112
	Gma18g01278	510	PANTHER	HIGH AFFINITY NITRATE TRANSPORTER-RELATED	10	496	-	-
	Gma18g01278	510	CDD	MFS_NRT2_like	46	439	IPR044772	GO:0015112
	Gma18g01278	510	Gene3D	MFS general substrate transporter like domains	244	446	IPR036259	-
	Gma18g01278	510	Gene3D	MFS general substrate transporter like domains	37	234	IPR036259	-
	Gma18g01278	510	SUPERFAMILY	MFS general substrate transporter	37	443	IPR036259	-
	Gma18g01278	510	MobiDBLite	consensus disorder prediction	470	510	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma18g01278	Gma-Chr18	21952443	21955687	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma18g01278	18	501	Inorganic Solute Cotransporters	AT1G12940	75.413	0.0	771

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma18g01278	K02575		-	gmx:100787888	946.036

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma18g01278	18	21952443	21955687	Gma18g01278	18	21952443	21955687	ECH