Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01240 ATGTTCATATTAATTGTTTATGTCAAAACCACCTCCACCATTATGAGCAATATGTCCAATAGCATGTTGGATCTCACTTGTTCCAATGTAATGAAATTTCAAGGGAAAAGCTCCTTGTTATTGCTTCTCCTTGTGCTCATAGCCCTTCATCTTGCATCTTCTCGAACTTCTGTTTATAATTGTGTCCTTGATATTCAATTTTCTCCATCCTTGATTAGTTCAAATTGTGAATTGTACAATTGGGGAGGGTTTACCCATGGCTGTTGTGGACCATATTTTGATGATTACCTATATGCCTTGGGGCTGAGGGCCAACCAAACTGGAAAAATATTCTTGAATTCCTCAGAGCAAGAAAACTGCATAGCATCAATGCAAGCTTTTGACAAAAACTTCACTTGTTATGGGATAGAGAAGCTAACAAGTGGAGTTGGTGGTTGCTCTGATTACACCATCACAGATGTTATTAATCATCATGGAGACAACTTTAGGAGACTGAATGAAGATTGCATGCCTTTTAGAAGAAATGGCAGGCCAAATGAAACTTGCACCAAATGTTTGAAAGCATGGGAGGATATCAGTGCAAAATCAGACTCTACAAGGGGATCAGAATCAGCAAATATCAATGTTTATCTTTGTAGGTTTGCTGTGCTTGTCTCAATAACAAGCACAAGAATTTATGATAGGGAATCAATTCAGGAAGTCTATAAATACCTTGGGGAACACACCCTTTCTGCAGTTAATCAAGAAGTTAAGGTTAAGGCTAGTGCTAATGCTAATATCAACTCAGGTCTCTGGATTGCCTTCGGTATAACAGGAGTTACAGCAGTGGTGTTTCTTGCCGCACTAGCATTATTTATCACAAGAATTAAAAGTGCTCCAACCGTACAAGATGAGTCTGATTCAACTTCACCGAAGATAACATTGAAGGATGTTTATGTAGCAACAAACAATCTCAGCGCTTCAAATTTCATAGGCCAAGGCATAGCCGGAAAAGTGTACAAAGGTGTGCTCTCCAACAATCAGTCTGTTGCAGTGAAGCATATCACCAATGAAGGTTACATGGAGACATTTGTTAGAGAAGTGAGAAGCCTTTCCCATGTTAGACATCAAAACCTAGTAGCTTTGCTGGGATACTGTGAAAGTGAAGCTGAATGCTTCCTAGTGTATGAGCTATGCCACAATGGAAACCTTTCAGAGTGGCTATTTGGCAATGGTAAAGTTCTTTCATGGATTCAAAGACTAGAGATTGTCATTGATAGTGCAAGAGGTCTTGAGTTTCTCCACACCTACCCAAATGGCTGCATTGTTCACCGTGATATAAAGCCATCAAACATTCTTATTGATGCCAACTTCCAAGCAAAGCTTTCAGATTTTGGGTTGTCCAGGGTTATGGACCTTGGTCAATCCTATGTGAGCTCTGAAGTAAGAGGAACGTTTGGTTATATTGATCCTGAATATAGGACAAATCACCATGTAAAAGCCTCAGGAGATGTCTACAGCTTTGGAATAGTGTTATTGCAACTTCTATCAGGACAAAGGGTACTTAACATTGATTTCCAGAGACCAATGTCTCTGGGTAAAATGGCCAGAGATGTTGTTAGAGGCGGTGATATGTCAGAATTTGCTGATCCTAAACTCAAAAGAGAGTACTCTGTTGAAGCATTTGACATCGTATTAAAGCTAGCTTTGTCTTGCATAGGGCTCAAGCAGCAAAGGCCATCTATAGAGCAAGTGTTGTATAGCCTAGAAAAGGCACTCGATATCTCTTTATAA 1773 0.3965 MFILIVYVKTTSTIMSNMSNSMLDLTCSNVMKFQGKSSLLLLLLVLIALHLASSRTSVYNCVLDIQFSPSLISSNCELYNWGGFTHGCCGPYFDDYLYALGLRANQTGKIFLNSSEQENCIASMQAFDKNFTCYGIEKLTSGVGGCSDYTITDVINHHGDNFRRLNEDCMPFRRNGRPNETCTKCLKAWEDISAKSDSTRGSESANINVYLCRFAVLVSITSTRIYDRESIQEVYKYLGEHTLSAVNQEVKVKASANANINSGLWIAFGITGVTAVVFLAALALFITRIKSAPTVQDESDSTSPKITLKDVYVATNNLSASNFIGQGIAGKVYKGVLSNNQSVAVKHITNEGYMETFVREVRSLSHVRHQNLVALLGYCESEAECFLVYELCHNGNLSEWLFGNGKVLSWIQRLEIVIDSARGLEFLHTYPNGCIVHRDIKPSNILIDANFQAKLSDFGLSRVMDLGQSYVSSEVRGTFGYIDPEYRTNHHVKASGDVYSFGIVLLQLLSGQRVLNIDFQRPMSLGKMARDVVRGGDMSEFADPKLKREYSVEAFDIVLKLALSCIGLKQQRPSIEQVLYSLEKALDISL 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01240 590 PANTHER - 54 589 - -
Gma18g01240 590 SUPERFAMILY Protein kinase-like (PK-like) 300 582 IPR011009 -
Gma18g01240 590 Gene3D Phosphorylase Kinase; domain 1 284 391 - -
Gma18g01240 590 ProSiteProfiles Protein kinase domain profile. 318 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01240 590 SMART serkin_6 318 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01240 590 Gene3D Transferase(Phosphotransferase) domain 1 392 589 - -
Gma18g01240 590 Pfam Protein kinase domain 322 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01240 590 Pfam SPARK 60 202 IPR043891 -
Gma18g01240 590 PANTHER OS01G0750732 PROTEIN 54 589 - -
Gma18g01240 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01240 Gma-Chr18 20159218 20162847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01240 306 588 Receptor kinase-like Gene Family AT1G67720 40.484 1.49e-59 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Gma18g01240 Pkinase 9.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01240 - - gsj:114395768 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01240 18 20159218 20162847 Gma18g01240 18 20159218 20162847 ECH