Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01238 ATGGCTTCTTCACTCAGAATTTCAAGACTCATCTCTCGCTCCTTTTCTTCTACCTCCTTCTTTTCACGAGGTGGGAATGGTTTCCTTGGTTCAAGACACTGCAAATACAGCACTTCTTCTGCCATTGAAGAAGAACCCGTTAAACCATCAGTGCAAGTAGAACACACCCAACTCTTAATTGATGGAAAATTTGTAGATGCTGCTTCTGGTAAAACTTTTCCAACTTTAGATCCTAGGACAGGTGAAGTAATTGCTCATGTTGCTGAGGGTCACTCTGAGGATGTTGATCGAGCAGTTGCAGCTGCACGAAAAGCATTTGATCATGGACCATGGCCTAAGATGACGGCTTATGAACGGCAAAGGATCTTGTTGCGCGCAGCTGATCTGCTTGAGAAGCATAATGATGAGCTTGCAGCACTTGAGACTTGGGATAATGGAAAGCCTTATGAACAAGCTGCTAAGATTGAAGTTCCAATGCTTGTTCGCCTGATTCGATACTATGCTGGTTGGGCAGATAAGATCCATGGTCTAACAGTTCCAGCTGATGGACCATATCATGTGCAAACATTACATGAACCAATTGGTGTTGCCGGTCAGATCATTCCTTGGAACTTCCCTCTTCTCATGTTTGCCTGGAAGGTTGGACCGGCATTGGCCTGTGGCAACACCATTGTTCTCAAAACAGCTGAGCAGACACCGTTATCTGCTTTATATGCAGCAAAACTATTTCATGAGGCTGGACTTCCTGCTGGTGTTTTAAATGTAGTATCTGGCTTTGGTCCAACTGCTGGTGCTGCTCTTGCTAGCCACATGGAAGTTGACAAGCTTGCTTTTACTGGTTCCACTGATACTGGGAAAGTTGTCCTTGAACTGGCAGCTAAAAGCAATCTTAAGCCTGTTACTTTGGAACTTGGTGGGAAATCCCCCTTTATTGTGTGTGAAGATGCTGATGTAGATCAGGCTGTTGAGCTAGCCCATTTTGCTTTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGGTCTCGAACATTTGTACATGAAAGTGTATACGATGAGTTTGTTGAGAAAGCAAAGGCTCGTGCTTTGAAGCGTGTTGTTGGTGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGATCAATTTGAGAAAATACTGAGGTACATCAGATCTGGTGTTGAAAGTGGGGCAACCCTTGAAACCGGAGGAGACAAGCTTGGCAACAAGGGCTTCTACATTCAACCTACAGTCTTCTCAAATGTTAAGGATGGCATGCTGATTGCAAGGGATGAGATCTTTGGTCCAGTCCAATCCATATTAAAATTCAAGGATCTTGGTGAGGTAGTTCAAAGAGCAAATAACACACGTTACGGGCTTGCGGCCGGAGTGTTCACAACGAACATGGACACTGCCTACACTTTGACGCGGGCACTGAGAGTTGGAACAGTGTGGATAAACTGCTTTGACACATTTGATGCTGCAATTCCCTTTGGAGGGTACAAGATGAGTGGTCAAGGCAGAGAAAAAGGAGAGTATAGTCTCAAAAACTACTTGCAAGTGAAGGCTGTTGTTAATCCCCTGAAAAACCCAGCATGGCTTTGA 1611 0.4463 MASSLRISRLISRSFSSTSFFSRGGNGFLGSRHCKYSTSSAIEEEPVKPSVQVEHTQLLIDGKFVDAASGKTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDHGPWPKMTAYERQRILLRAADLLEKHNDELAALETWDNGKPYEQAAKIEVPMLVRLIRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPAGVLNVVSGFGPTAGAALASHMEVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFVEKAKARALKRVVGDPFKGGIEQGPQIDSDQFEKILRYIRSGVESGATLETGGDKLGNKGFYIQPTVFSNVKDGMLIARDEIFGPVQSILKFKDLGEVVQRANNTRYGLAAGVFTTNMDTAYTLTRALRVGTVWINCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVNPLKNPAWL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01238 536 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 28 536 - -
Gma18g01238 536 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 330 341 IPR016160 GO:0016491
Gma18g01238 536 SUPERFAMILY ALDH-like 51 529 IPR016161 GO:0016491
Gma18g01238 536 Pfam Aldehyde dehydrogenase family 64 526 IPR015590 GO:0016491
Gma18g01238 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 60 524 IPR016162 GO:0016491
Gma18g01238 536 CDD ALDH_F2BC 53 527 - -
Gma18g01238 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 306 495 IPR016163 GO:0016620
Gma18g01238 536 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 302 309 IPR029510 GO:0016491
Gma18g01238 536 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 28 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01238 Gma-Chr18 20095592 20099200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01238 6 536 Aldehyde Dehydrogenase Gene Family AT3G48000 77.903 0.0 882
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01238 K00128 - gmx:100777399 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01238 18 20095592 20099200 Gma18g01238 18 20095592 20099200 ECH
Gma01g00294 01 3327086 3331007 Gma18g01238 18 20095592 20099200 PCT
Gma02g00302 02 3178533 3182912 Gma18g01238 18 20095592 20099200 PCT
Gma18g01238 18 20095592 20099200 Gma01g00294 01 3327086 3331007 PCT
Gma18g01238 18 20095592 20099200 Gma02g00302 02 3178533 3182912 PCT