Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01234 atgtaccttgtcagctgcatgatccacaagctgaacatcctcagcaacagAAGTAGCAGTGGTGGGAGCAACAAGTCAAGGTGGGTTGATGGAAGTGAAATGGACTGGGATGAGGTTCCTATGTGGAGAAGGCTTGCCAAGAAGCCCAATAGGATTGACTCATTTGATGTTGAAGCCATGGAGATTGCTGGAACTCGTGCTCACCACTCCAAGGACCTTTCCCTCTGGCCCACTATTGCATTGGCATTTAAGACTCTTGGTGTGGTATATGGTGACATGGGAACAAGTCCTCTATATGTTTTTGTTGATGTCTTCAGCAAGGTTCCAATTGGATCAAATGATGATATCTTGGGGGCATTATCATTAGTAATGTCTACAATATCACTTATTCCATTAGCGAAATATGTTTTTGTAGTCCTCAAAGCAAATGACAGCGGAGAAGGAGGAACGTTTACACTATACTCGCTGATTTGCAGGTATGCAAATGTGAGCCTGCTTCCAAATTGTCAACAAGCTGATGAACATATCTCTAGTTTTACGCTCAAACTGCCTACTCCAGAATTGGAAGGGACTTTAAAAATAAATGAtatggcaccctctaccccatacatatatTTTGCAAAAGGAGCCTACAGTAGTAAAACAGCCTCCATGGTTATTGGAGATGGTATTCTAACCCCAGCAATAGCAGTGATGCCTGCCATAAGTGGTCTGCAGGATCAAATAGATGAATTTGGTACAGGTGCAGAAGCAATGTTTGCATATCTGGGCCAGCAATACAAGTTTATTGCCTTCACTTGTGTGGTATTTCCCTATCTCCTACTCGCTTATATGGGCCAAGCTGCTTTTTTGACGAAGAACCCAAGTTCTTATGCAAGTGTATTCTACAAGTCTGTTCCAGAGAGTCTCTTCTGGCCAATGTTTGTGATTGCCACACTTGCTGCTATGATTGCCAGCCAAGCAATGATATCTGCTACATTTTCATGCATAAAGCAATCTATGGCTTTGGGATGCTTCCCCAGGCTCAAGATAATTCACACCTCaacactacaagaaattttccatgtagctacaaacatttttacctacagacataatttagttgacaatttttgtccgtatgtgggtcaAATTTACATCCCCATAATCAACTGGTTTTTGATGATCATGTGCATAGTCGTGATTTCCATCTTCCAAAGCACAACTGATATTGCAAATGCATATGGCATTGCTGAAGTTGGTGTCATGATGACTAACTTGTTTTTGGCATTTTCTTTCGCTCTTGTATTTGGTTCAGTGGAGTTAATTTACTTGTCTTCTGTCCTATCCAAAATCATTGAGGGTGGCTGGCTTCCACTTGCCTTTGCTACCTTTTTCCTCTCAGTGATGTACACATGGAACTATGGGAGTGTATTGAAGAACAAAAGTGAAGTTAGAGAGAAGGTTTCAGTGGACTCAATGCTTGAGCTTGGCTCCAATCTTGGAACAGTAAGAGTGCCAGGAATAGGATTGCTATACAATGAACTTGTCCAGGGCATTCCCTCCATTTTCCTACAGTTCCTGCTGAACCTTCCAGCTCTTCACTCTACTATAGTTTTTGTCTGCATTAAATATGTCTCAGTCCGTGTGGTTCCTCAAGAAGAAAGATTTCTATTTCGACGAGTTTGCCCCAAAGATTACCACATATTCCGTTGTGTCGCCCGATATGGCTACAAAGATGTTAGGAAGGAAGATCACCATGCATTTGAGCAGCTTCTTATTGAGAGTCTTGAGAAATTCTTGAGAAGGGAAGCTCTAGAAACAGCCTTGGAGTTGGAGGGCAATTCAAGTGATGACATGGACAATGTCTCAGTGAATACAAGAGATTCTGATGCTCCTGTTGGTACCGTGGCTGAGGAGCTTAGGATTCCCCTGATTGATGATCAGAAATTGGAAGAAACAGAAATTTCTTCTACCTCTCAAGAAGTTGCATCAGCATTGCCATCTAGTTACATGTCATCAGATGAAGATCCTGCTCTTGAATATGAGCTTTCAGCCCTTAGAGAAGCAATGGAATCAGGATTCACCTATTTGCTTGGACATGGGGATGTGAGGGCAAAGAAGAACTCTTTTTTCTTTAAGAAATTGATGATAAATTATTTCTATGCATTCCTCAGAAAGAACTGCAGAGGAGGTACAGCAAACATGAGAGTACCTCACACCAATATCATCCAAGTTGGGATGACATATATGGTCTGA 2238 0.3883 MYLVSCMIHKLNILSNRSSSGGSNKSRWVDGSEMDWDEVPMWRRLAKKPNRIDSFDVEAMEIAGTRAHHSKDLSLWPTIALAFKTLGVVYGDMGTSPLYVFVDVFSKVPIGSNDDILGALSLVMSTISLIPLAKYVFVVLKANDSGEGGTFTLYSLICRYANVSLLPNCQQADEHISSFTLKLPTPELEGTLKINDMAPSTPYIYFAKGAYSSKTASMVIGDGILTPAIAVMPAISGLQDQIDEFGTGAEAMFAYLGQQYKFIAFTCVVFPYLLLAYMGQAAFLTKNPSSYASVFYKSVPESLFWPMFVIATLAAMIASQAMISATFSCIKQSMALGCFPRLKIIHTSTLQEIFHVATNIFTYRHNLVDNFCPYVGQIYIPIINWFLMIMCIVVISIFQSTTDIANAYGIAEVGVMMTNLFLAFSFALVFGSVELIYLSSVLSKIIEGGWLPLAFATFFLSVMYTWNYGSVLKNKSEVREKVSVDSMLELGSNLGTVRVPGIGLLYNELVQGIPSIFLQFLLNLPALHSTIVFVCIKYVSVRVVPQEERFLFRRVCPKDYHIFRCVARYGYKDVRKEDHHAFEQLLIESLEKFLRREALETALELEGNSSDDMDNVSVNTRDSDAPVGTVAEELRIPLIDDQKLEETEISSTSQEVASALPSSYMSSDEDPALEYELSALREAMESGFTYLLGHGDVRAKKNSFFFKKLMINYFYAFLRKNCRGGTANMRVPHTNIIQVGMTYMV 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01234 745 PANTHER POTASSIUM TRANSPORTER 12-RELATED 247 745 - -
Gma18g01234 745 PANTHER POTASSIUM TRANSPORTER 12-RELATED 24 247 - -
Gma18g01234 745 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 247 745 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gma18g01234 745 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 24 247 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gma18g01234 745 Pfam K+ potassium transporter 82 242 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gma18g01234 745 Pfam K+ potassium transporter 375 573 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gma18g01234 745 Pfam K+ potassium transporter 247 351 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01234 Gma-Chr18 20007213 20028509 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01234 247 745 Inorganic Solute Cotransporters AT1G60160 67.692 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01234 K03549 - ncol:116258738 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01234 18 20007213 20028509 Gma18g01234 18 20007213 20028509 ECH
Gma18g01234 18 20007213 20028509 Gma01g00296 01 3378272 3384668 PCT
Gma18g01234 18 20007213 20028509 Gma02g00299 02 3137066 3143781 PCT