Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01232 ATGGATCTGGACCGTGGGATTGTTCAGAACTCTGATAAGGTGAATTGGAGGAAAGAATCATGGAAAACGGTGTTAACTCTGGCATATCAGAGTCTTGGAGTAGTGTATGGAGAGATTAGCACTTCACCACTCTACGTGTACAGGAACACATTTGCTGAAGACATTGGTCACTCAGAGACCAATGAAGAGATTTATGGTGTTTTGTCTTTGGTATTCTGGACTCTCACATTGGTGCCTTTGGTGAAGTATGTGTTCATAGTGCTGAAAGCTGATGACAATGGTGAAGGTGGCACGTTCGCACTGTATTCTTTGCTGTGTCGCCATGCCAAGGTTGGCTTGTTGCCTAATTGCCAATTGGCCGATGAGGAGCTCTCGGAGTACAAAAAGCACAGCTGTGGCATGGCACCGGAGAGAAGCCTTGCCTTCAGGCTCAAGTCCTTGTTGGAGAGGCACAAGGTCTTGCAGAGGATTTTGCTGGTTCTGGCTTTGTTAGGGACTTGCATGGTGATTGGTGTTGGAGTCCTTAAACCTACTATTTCTGTTTTCTCAGCAGTGTCTGGCCTTGAGCTTTCAATGTCCAAGGAGCATCACAGATATGTAGAAGTTCCAGGTGCCTGCATCATATTGATAGGCTTGTTTGCCCTTCAACGTTATGGCACAGACAAGGTTGGCTTCTTGTTTGCCCCCATAGTTTGCATATGGCTCTTCTGCATCAGTGCCATTGGTATATATAATATCTTTTACTGGAACCCTCATGTGTACCAAGCACTCTCTCCATATTATGTTTTTCAATTTTTAAAGAAGACTAGAAGAGGAGGTTGGATGGCCCTTTGTGGAATTTTGTTGTGCATAACAGGATCAGAAGCCATGTTTGCTGGTCTTGGGCACTTTTCCCAGCTATCATTCAAGATTGCTTTCACCTCTTTGGTCTATCCATCTTTAATCCTCGCGTATATGGGGCAAGCTGCTTATTTTTCTAGACATCATGATGTTGAGCAAGAGTACCACTTTGGCTTTTATGTATCTGTACCAGAGAAGTTGAGATGGCCTGTTCTTGTGATAGCCATACTTGCTGCGGTTGTGGGAAGCCAATCCATCATCACTGGAACTTTCTCAATCATCAGGCAATGCTCTGCATTAAGTTGCTTTCCTAGAGTTAAAGTGGTTCACACTTCATCCAAAATCCATGGACAAGTATATATCCCTGAGATCAACTGGTTGTTGATGCTCTTGTGTTTGGCTGTAACTATTGGTTTTAGAGACACAAAGCTTATGGGTAATGCATCAGGTTTGGCAGTAGTCTCAGTGATGCTGGTCACCTCATGTTTGATGTCACTGGTTATTGTAATCTGCTGGCACAAGAATGTTATGCTTGCAATTGGGTTTGTTCTCTTCTTTGGCACCATTGAGGCCCTCTTCTTCTCAGCTTCTGTGATCAAGTTCTTCGAAGGAGCGTGGGTGCCGGTTGCTTTGGCATTTGTGTTTCTGTCAGTCATGTGTGTGTGGCACTATGGCACTCTCAAGAAGTATGAATTTGATGTCCAAAACAAGGTTTCACTTAGCTGGTTACTCAGCCTTGGCCCTACCTTAGGCTTTGCAAGAGTACGCGGGATTGGCCTTGTGCACACTGAGCTAGTGTCTGGAATCCCTGCCATTTTCTCCCACTTTGTGACCAACCTACCAGCATTCCACCAAATCCTTGTCTTCCTATGCATCAAACATGTGCCAGTTCCACATGTTAGGCCTGAGGAAAGGTTCCTAGTTGGTCGTGTCGGTCCAAGAGACTTCAGAGTTTACAGGTGCATAGTGAGGTATGGATACCATGATGTCCACAAAGATGATGATGAGTTTGAGAAAGACCTTGTGTGCAGCATAGCGAAGTTCATTCAAGCAGGAAGTGGTGGTGGATGCAATAACTCGTCAAATGATGAGCCTGAAAAGGGTGGTGGCAAAATGACAGTTGTTGGAACCTGTTCTAGTACTAGCCACCACCCCATTTTGGTTAGTGAGAATGCTCATGAGGTTAATCATGTGGACAAAGCTGAGACATCATCAGAGTCACACAAGGTGGTCAAACCAAAGAAAAAGGTTAGGTTTATTGTGCCTGAGAGTCCAAAGATTGACACTGGTGCAATGGAGGAGTTGAAAGAATTAATGCAAGCCAGGGAAGTTGGGGTGGCCTACATTATAGGACAGTCCTACATGAGAGCCAAACCAGGGTCCAGCATGTTGAAGAAGTTGGCCATTAATTTAGGGTATGAATTCTTAAGAAAGAATAGTAGAGAGCCCTCCTATGAACTTAGTGCTCCCCATGAATCCTCTTTGGAGGTTGGGATGATGTACCAAGTTTAA 2352 0.4464 MDLDRGIVQNSDKVNWRKESWKTVLTLAYQSLGVVYGEISTSPLYVYRNTFAEDIGHSETNEEIYGVLSLVFWTLTLVPLVKYVFIVLKADDNGEGGTFALYSLLCRHAKVGLLPNCQLADEELSEYKKHSCGMAPERSLAFRLKSLLERHKVLQRILLVLALLGTCMVIGVGVLKPTISVFSAVSGLELSMSKEHHRYVEVPGACIILIGLFALQRYGTDKVGFLFAPIVCIWLFCISAIGIYNIFYWNPHVYQALSPYYVFQFLKKTRRGGWMALCGILLCITGSEAMFAGLGHFSQLSFKIAFTSLVYPSLILAYMGQAAYFSRHHDVEQEYHFGFYVSVPEKLRWPVLVIAILAAVVGSQSIITGTFSIIRQCSALSCFPRVKVVHTSSKIHGQVYIPEINWLLMLLCLAVTIGFRDTKLMGNASGLAVVSVMLVTSCLMSLVIVICWHKNVMLAIGFVLFFGTIEALFFSASVIKFFEGAWVPVALAFVFLSVMCVWHYGTLKKYEFDVQNKVSLSWLLSLGPTLGFARVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKHVPVPHVRPEERFLVGRVGPRDFRVYRCIVRYGYHDVHKDDDEFEKDLVCSIAKFIQAGSGGGCNNSSNDEPEKGGGKMTVVGTCSSTSHHPILVSENAHEVNHVDKAETSSESHKVVKPKKKVRFIVPESPKIDTGAMEELKELMQAREVGVAYIIGQSYMRAKPGSSMLKKLAINLGYEFLRKNSREPSYELSAPHESSLEVGMMYQV 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01232 783 TIGRFAM kup: potassium uptake protein 27 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gma18g01232 783 Pfam K+ potassium transporter 29 609 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gma18g01232 783 PANTHER POTASSIUM TRANSPORTER 6 12 783 - -
Gma18g01232 783 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 12 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01232 Gma-Chr18 19944464 19950303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01232 1 783 Inorganic Solute Cotransporters AT1G70300 70.818 0.0 1157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01232 K03549 - gmx:100784861 1546.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01232 18 19944464 19950303 Gma18g01232 18 19944464 19950303 ECH
Gma01g00296 01 3378272 3384668 Gma18g01232 18 19944464 19950303 PCT
Gma02g00299 02 3137066 3143781 Gma18g01232 18 19944464 19950303 PCT