Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01231 ATGGCTTCAAGATCATATGCTAATCTCTTTGACTTAGCTAGTGGAGACTTTCTTGATTTTCCTTGCACCCCAAGAGCTCTTCCAAGGGTTATGACTGTTCCTGGAATTATTTCGGACCTGGATGGTTATGGTTGTAATGATGGGGATTCAGATGTTAGTTCTTCTGGATGTAGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCAGTGCAGGCTAAAAGAGATATAGAAACTGCTAAATGGGTTTTCAGTTGGGATGAGGATTCAATTTTGTTACAATTAAAAGATGGTTTTTCTGCTGATAGTGAGGTAATCTATGTGGGTTCTCTCAAGGTTGAAATAGATGCCTGTGAGCAGGATGCAGTTGCTCAGAGATTGCTAGATGAATTTAATTGTGTACCTACCTTTCTTCCCCATGATCTCCAAAAAAGGTTCTACCTTGGATTTTGTAAGCAGCAACTTTGGCCTCTCTTTCATTATATGCTACCTATATGCCCAGATCACGGTGATCGCTTTGACCGTATACTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAGGTCATGGAAGTAATTAATCCTGATGATGATTTTGTTTGGGTTCATGATTATCACTTAATGGTTTTGCCTACTTTCTTGAGGAAGCGATATAATCGGGTTAAACTTGGGTTCTTTCTGCATAGTCCTTTCCCTTCATCTGAAATCTACCGAACTTTACCAGTAAGGGATGAAATTTTGAGGGGATTGTTGAACTCTGATTTAATTGGCTTTCATACATTTGATTATGCTCGCCACTTTCTTTCTTGCTGCAGTAGAATGCTAGGTCTGGACTATGAATCTAAGCGAGGACATATAGGGCTTGATTACTTTGGCCGCACTATATTTATTAAAATTTTGCCTGTAGGCATTCACATGGGTAGGCTTGAATCTGTGTTAAATCTTTCTTCTACATCTGCTAAACTAAAAGAGGTTCAGGAAGAGTTTAAGGATAAGAAAGTAATTCTTGGTATTGATGACATGGATATTTTTAAGGGCATTAGTCTGAAACTTCTAGCTGTGGAGCATCTGCTGCAGCAGAATCCAGATTTGCAGGGCAAAGTTGTCCTAGTTCAAATTGTAAATCCTGCAAGGGGCTCGGGGAAGGATGTTCAGGAAGCAAAGAACGAAACATATTTAATTGCCCAGAGAATCAACGATACATATAGCTCAAATAATTATCAGCCAGTCATTCTCATTGACCGCCCTGTTCCTCGCTTTGAGAAGAGTGCCTATTATGCTGTAGCTGAATGTTGCATTGTTAATGCTGTAAGGGATGGTATGAACTTAGTCCCATACAAATATATCGTCTGCAGACAGGGAACTGCACAACTAGATGAAGCATTGGATAGAAAAAGTGATTCTCCTCGTACAAGCATGCTTGTGGTGTCTGAGTTCATTGGTTGTTCACCTTCTCTTAGTGGGGCAATAAGGGTCAATCCCTGGGACATAGATGCCGTAGCCGATGCTATGTATGCCGCCCTTACAATGAGTGTTTCAGAGAAGCAGTTGCGCCATGAGAAACACTATCGGTATGTGAGTTCTCATGATGTTGCATATTGGGCGCACAGCTTTATGCTGGATTTGGAGAGAGCCTGCAAAGATCATTACACCAAAAGATGCTGGGGATTTGGTTTGGGCTTGGGGTTCAGAGTTGTTTCTCTTTCTCATGGTTTCAGGAAGCTGTCAATTGACCATATTGTTTCAGCATACAAGAGAACCAATAGAAGGGTCATCTTTCTTGATTATGATGGTACTGTTGTACCTCAATCTTCCATAAGTAAAACCCCCAGCCCTGAAGTCATCTCTGTCTTAAATGCTCTGTGTAACAATCCCAAGAATATTGTGTTCATTGTTAGTGGGAGGGGGAGGGATTCACTGAGTGAATGGTTTACTTCATGCCAAATGCTTGGACTTGCAGCAGAACATGGGTACTTTTTAAGGTGGAACAAAGATTCAGAATGGGAAGCAAGTCACTTATCTGCGGACCTTGATTGGAAAAAGATGGTGGAACCTGTGATGCAGTTGTATACAGAAGCAACTGATGGTTCTAATATTGAAGTTAAGGAGAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGCCAAGCCAAAGAATTGTTGGATCACTTGGAAAGTGTGCTTGCTAATGAACCAGCAGCTGTTACGAGAGGTCAGCATATTGTTGAAGTTAAGCCACAGGGAATAAGCAAGGGGTTGGTAGCTGAACAGGTTCTTATGACCATGGTTAATGGCGGCAATCCACCAGATTTTGTGCTGTGCATTGGAGATGATAGGTCCGATGAGGACATGTTTGAGAGCATTTTGAGGACAGTTTCGTGCCCATCATTACCATCAGCTCCAGAGATCTTTGCCTGCACTGTGGGTAGGAAGCCTAGCAAGGCCAAGTATTTTCTTGATGATGCTTCTGATGTTGTGAAGTTGCTTCAGGGCCTTGCTGCTTCATCCAATCCAAAACCCAGGCATCTTGCTCATTCTCAAGTCTCTTTTGAGAGCACAGTTTGA 2586 0.4192 MASRSYANLFDLASGDFLDFPCTPRALPRVMTVPGIISDLDGYGCNDGDSDVSSSGCRERKIIVANMLPVQAKRDIETAKWVFSWDEDSILLQLKDGFSADSEVIYVGSLKVEIDACEQDAVAQRLLDEFNCVPTFLPHDLQKRFYLGFCKQQLWPLFHYMLPICPDHGDRFDRILWQAYVSANKIFADKVMEVINPDDDFVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLESVLNLSSTSAKLKEVQEEFKDKKVILGIDDMDIFKGISLKLLAVEHLLQQNPDLQGKVVLVQIVNPARGSGKDVQEAKNETYLIAQRINDTYSSNNYQPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTAQLDEALDRKSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMYAALTMSVSEKQLRHEKHYRYVSSHDVAYWAHSFMLDLERACKDHYTKRCWGFGLGLGFRVVSLSHGFRKLSIDHIVSAYKRTNRRVIFLDYDGTVVPQSSISKTPSPEVISVLNALCNNPKNIVFIVSGRGRDSLSEWFTSCQMLGLAAEHGYFLRWNKDSEWEASHLSADLDWKKMVEPVMQLYTEATDGSNIEVKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAAVTRGQHIVEVKPQGISKGLVAEQVLMTMVNGGNPPDFVLCIGDDRSDEDMFESILRTVSCPSLPSAPEIFACTVGRKPSKAKYFLDDASDVVKLLQGLAASSNPKPRHLAHSQVSFESTV 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01231 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 549 - -
Gma18g01231 861 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Gma18g01231 861 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 852 - -
Gma18g01231 861 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Gma18g01231 861 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 594 794 IPR006379 -
Gma18g01231 861 Gene3D - 721 853 IPR023214 -
Gma18g01231 861 Gene3D - 591 709 IPR023214 -
Gma18g01231 861 Gene3D Glycogen Phosphorylase B; 54 312 - -
Gma18g01231 861 Gene3D Glycogen Phosphorylase B; 313 529 - -
Gma18g01231 861 CDD HAD_TPP 593 834 - -
Gma18g01231 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 852 IPR001830 GO:0003824|GO:0005992
Gma18g01231 861 Pfam Trehalose-phosphatase 595 829 IPR003337 GO:0003824|GO:0005992
Gma18g01231 861 TIGRFAM T6PP: trehalose-phosphatase 590 839 IPR003337 GO:0003824|GO:0005992
Gma18g01231 861 SUPERFAMILY HAD-like 592 840 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01231 Gma-Chr18 19804934 19807727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01231 1 861 Trehalose Biosynthesis Gene Families AT1G60140 73.635 0.0 1365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01231 K16055 - gmx:100775779 1749.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01231 18 19804934 19807727 Gma18g01231 18 19804934 19807727 ECH
Gma01g00297 01 3394153 3400151 Gma18g01231 18 19804934 19807727 PCT
Gma02g00298 02 3122356 3127628 Gma18g01231 18 19804934 19807727 PCT
Gma18g01231 18 19804934 19807727 Gma01g00297 01 3394153 3400151 PCT
Gma18g01231 18 19804934 19807727 Gma02g00298 02 3122356 3127628 PCT