Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01212 ATGCCATTTGGTTTGGTCTCAGCTTGGAACAAGCGTCGAAGAAGCAAGTCTCAAGATCATTCAGACCCTTGGATTTATAAACCTGCAGAGTTTTGGCAGCTTGAAGATCAAACACCACAACCTACAAAAAGGAGGCATAGATCATCTGTTTTCACACTCAGGGAGATGGAACAGGCAACATTTTCATTCAGTGATGATAATCTGCTTGGAAAAGGAGGATTTGGCAGGGTCTACAGGGGCACTTTGAAGTCAGGAGAGGTTGTAGCAATCAAGAAGATGGAGCTGCCTGCAATTAAAGCAGCAGAGGGGGAGCGCGAATTCCGAGTGGAGGTTGACTTATTAAGCAGACTTGACCACCCAAATCTTGTTTCTTTGATAGGATACTGTGCTGATGGGAAGAATAGGTTCCTAGTATACGAATATATGCATAATGGTAACCTGCAAGATCATCTGAATGGCAAGTCATGTACTCAAAATCCACATTATGTGAAAATCTTCTTACATCCATCTTCTATTAATCAATGTGTAATTTTAGGAATTGGGGAAAGAAAGATGGATTGGCCTTTAAGACTTAAAGTGGCACTGGGAGCAGCAAAAGGACTTGCTTATCTTCATTCAAGTTCTTGTCTTGGAATTCCTATTGTTCATAGAGATTTCAAATCCACCAATGTTCTTCTAGATGCCAAATTTGAAGCAAAGATATCTGATTTTGGGCTTGCCAAACTAATGTCAGAAGGACAGGAGACACATGTTACTGCAAGAGTACTTGGCACCTTTGGCTATTTTGACCCTGAGTATACATCGACTGGAAAACTTACTCTACAAAGTGATGTTTATGCTTTTGGAGTTGTTCTTCTGGAGCTTTTGACAGGACGTCGAGCTGTAGATCTGAACCAGGGCCCAAATGATCAAAACCTTGTACTACAGGTGAGACACTTACTGAATGACCAAAAGAAGCTCCGTAAGGTGATAGATCCAGAGATGACTCGAAATTCTTACACCATGGAGTCTATATTCATGTTTGTCAATCTGGCGTCACGGTGTGTTCGTAGTGAGAGTAATGAGAGACCTTCAATGGTAGATTGTGTCAAAGAAATCCAAACGATTTTGTACACAAATTCAAAGGGTTTGGGAATGGTTATGCATAGCTTGAGATTGGTCTAA 1164 0.4107 MPFGLVSAWNKRRRSKSQDHSDPWIYKPAEFWQLEDQTPQPTKRRHRSSVFTLREMEQATFSFSDDNLLGKGGFGRVYRGTLKSGEVVAIKKMELPAIKAAEGEREFRVEVDLLSRLDHPNLVSLIGYCADGKNRFLVYEYMHNGNLQDHLNGKSCTQNPHYVKIFLHPSSINQCVILGIGERKMDWPLRLKVALGAAKGLAYLHSSSCLGIPIVHRDFKSTNVLLDAKFEAKISDFGLAKLMSEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHLLNDQKKLRKVIDPEMTRNSYTMESIFMFVNLASRCVRSESNERPSMVDCVKEIQTILYTNSKGLGMVMHSLRLV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01212 387 CDD STKc_IRAK 69 369 - -
Gma18g01212 387 SUPERFAMILY Protein kinase-like (PK-like) 49 372 IPR011009 -
Gma18g01212 387 ProSiteProfiles Protein kinase domain profile. 63 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01212 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Gma18g01212 387 Gene3D Phosphorylase Kinase; domain 1 30 141 - -
Gma18g01212 387 Gene3D Transferase(Phosphotransferase) domain 1 142 379 - -
Gma18g01212 387 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Gma18g01212 387 PANTHER OS01G0750732 PROTEIN 174 386 - -
Gma18g01212 387 PANTHER OS01G0750732 PROTEIN 1 154 - -
Gma18g01212 387 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 174 386 - -
Gma18g01212 387 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 154 - -
Gma18g01212 387 Pfam Protein tyrosine and serine/threonine kinase 67 365 IPR001245 GO:0004672|GO:0006468
Gma18g01212 387 PIRSF ILK 181 377 - -
Gma18g01212 387 PIRSF ILK 29 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01212 Gma-Chr18 19139792 19145111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01212 50 366 Receptor kinase-like Gene Family AT3G58690 43.849 3.07e-84 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Gma18g01212 PK_Tyr_Ser-Thr 6.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01212 - - gmx:100819242 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01212 18 19139792 19145111 Gma18g01212 18 19139792 19145111 ECH