Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01204 ATGAATGCGGAATCACCGCCGGGGCTCCTCATGTCGGTTTCCTGCCTCTCCGACTACGACCTCCTCTGCGGCGAGGACTCCTCCGGAATCCTCTCCGGAGAGTCGCCGGAGTGCTCCTTCTCCGACATCGACTCCTCACCTCCTCCGCCGTCGCCGACGACAGAGGATTGTTATTCGATCGCGAGCTTCATCGAGCACGAGCGCAACTTCGTTCCGGGATTCGAGTACCTGTCGCGGTTCCAATCTCGCTCCCTGGACGCCAACGCCAGAGAAGAATCAGTTGGATGGATTCTCAAGGTACACGCGTACTATGGCTTTCAGCCTTTGACGGCGTACCTCGCCGTCAACTATATGGATCGGTTTTTGGATTCTCGCCGGTTGCCGGAAACAAATGGGTGGCCTCTGCAACTTGTATCTGTTGCATGCTTGTCTTTGGCAGCAAAGATGGAAGAACCTCTTGTTCCATCTCTCTTGGACCTTCAGATAGAAGGTGCCAAGTACATATTTGAGCCGAGAACAATTCGTAGGATGGAGCTACTTGTTCTCGGTGTCTTAGATTGGAGGCTAAGATCAGTAACACCACTTTGCTTCCTCGCTTTCTTTGCGTGCAAAGTAGATTCAACTGGAACTTTTATCCGGTTCCTTATTTCCAGGGCAACAGAAATCATCGTATCTAATATCCAAGAGGCTAGCTTTCTTGCTTACTGGCCTTCATGCATTGCTGCTGCAGCCATACTCACTGCAGCTAATGAAATTCCTAATTGGTCTGTGGTTAAGCCCGAAAATGCTGAGTCATGGTGCGAGGGACTAAGAAAAGAAAAAGTAATAGGGTGCTACCAGTTGATGCAAGAGCTTGTGATTAACAATAACCAACGGAAACTCCCTACTAAAGTGTTGCCGCAGCTGCGAGTAACAACTCGGACCCGAATGAGGTCAAGTACTGTATCATCATTCTCATCATCCTCTTCAACCTCCTTCTCCTTGTCTTGTAAGAGGAGGAAATTAAATAACCGTTTGTGGGTAGATGACAAAGGAAACTCCGAGTGA 1047 0.4928 MNAESPPGLLMSVSCLSDYDLLCGEDSSGILSGESPECSFSDIDSSPPPPSPTTEDCYSIASFIEHERNFVPGFEYLSRFQSRSLDANAREESVGWILKVHAYYGFQPLTAYLAVNYMDRFLDSRRLPETNGWPLQLVSVACLSLAAKMEEPLVPSLLDLQIEGAKYIFEPRTIRRMELLVLGVLDWRLRSVTPLCFLAFFACKVDSTGTFIRFLISRATEIIVSNIQEASFLAYWPSCIAAAAILTAANEIPNWSVVKPENAESWCEGLRKEKVIGCYQLMQELVINNNQRKLPTKVLPQLRVTTRTRMRSSTVSSFSSSSSTSFSLSCKRRKLNNRLWVDDKGNSE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01204 348 SMART Cyclin_C_2 192 327 IPR004367 -
Gma18g01204 348 Gene3D - 62 255 - -
Gma18g01204 348 SUPERFAMILY Cyclin-like 59 189 IPR036915 -
Gma18g01204 348 CDD CYCLIN 96 182 IPR013763 -
Gma18g01204 348 Pfam Cyclin, N-terminal domain 61 189 IPR006671 -
Gma18g01204 348 Gene3D - 73 190 - -
Gma18g01204 348 SUPERFAMILY Cyclin-like 174 290 IPR036915 -
Gma18g01204 348 SMART cyclin_7 95 183 IPR013763 -
Gma18g01204 348 Pfam Cyclin, C-terminal domain 192 303 IPR004367 -
Gma18g01204 348 PANTHER CYCLINS 15 337 IPR039361 -
Gma18g01204 348 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 15 337 - -
Gma18g01204 348 MobiDBLite consensus disorder prediction 34 53 - -
Gma18g01204 348 ProSitePatterns Cyclins signature. 90 121 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01204 Gma-Chr18 18852831 18858190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01204 9 347 Core Cell Cycle Gene Families AT1G70210 62.865 8.60e-140 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01204 K18810 - gmx:100818190 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01204 18 18852831 18858190 Gma18g01204 18 18852831 18858190 ECH
Gma01g00495 01 6916890 6922559 Gma18g01204 18 18852831 18858190 PCT
Gma02g00268 02 2823446 2826593 Gma18g01204 18 18852831 18858190 PCT
Gma18g01204 18 18852831 18858190 Gma01g00495 01 6916890 6922559 PCT
Gma18g01204 18 18852831 18858190 Gma02g00268 02 2823446 2826593 PCT