Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01189 ATGCTCCGCCTCTTCTTCCACAACTGTATGGTTGGCGGCTGCGACACTTCCATCCTCGTCACCTCCAACACCTTCAACAAGGCGGAGCGTGACGCAGCCGTCAACCTCCTCCTCTCGGGGGACGGGTTTGACACAGTGGCGCGCGCCAAGGCGCCCTCTAGCTTGAGTGCCCTGGCGTCGCCTCCTGTGCCGACATCCTGGCCGTGGCCGCACACGATCTCGTTGTTGCAGTCGGTGGCCCCACCTTTGATCTCCGCCTCGGTCGGAAAGACTCCCTCGAATCAAAAGCCACTGACCCTGAAAACCAATTCCCCTTACCAACCATGTCTTTGTCAGAAGCTTTTCAACTTTAACAAGAATTCCGAAATTGACCCTGCGTATAACCCTGATTACGCTGCGGGGTTGAAGAAACTGTGTCAAAATTACACCAAAGACCCTTCCATGTCAGCGTTTAACGACGTGATAACTCCCACGAAGTTTGATAACATGTATTACAAGAACTTGCGGAAAGGAATGGGATTGTTGGCCACTGATAGTGCCATGTTTGATGATTCCAGATCGAGGCCCTTCGTTGACAGGTACGCGGATGATGAAAAGAAGTTCTTTCAGGATTTCGCACGTGCCATGGAAAAACTTAGTGTGTTGCAGGTTAAGACCGAAGGAAAAGGAGAGGTGCGGTCGAGCTCTTCATCTGAAGGGTCAAGCAGTGGCGAAGCAAGCGAAGAAGAGTCAAGTAGTAATGGTGCTGAAATCCGCACCACTGCTTATGTTGGAAACCCAAGGAGGTCTTCATTTGTGTGGCTGGCCTTGTTGCTGATCATCACTTATTTCTGTTCATCCATTTATCATTATCAGTTTCAGAGCATGCCTGTGCCTCTTACTGCAGAAGAGGCCGCCGGCAAGAGGGGGTTTTCGGAGATTGAAACATTCAAACATGTCAGGGCCTTAACTCAGTTGGGGCCTCATCCTGTTGGTTCTGAAGCTCTGCAGTATGTCTTGACAGCATGTGAAAATATTAAGAAAACTGCTCTCTGGGAGGTAGATGTTATGGATATTTTTCATGCAAAGTTCGGTGCAAATCATATGCGCTGTGGCTTATTTTCAGGGAGAACACTTGTTTATTCAAATCTAAATAGTGTCCTAGTAAGAATCTTGCCGAGATATGTATCTGAAGAAGGGAGCAATCTATTCTGGTCTCTTCTAATATTGACAtGTGTTATGCTGGAACTTGCTCGTGGAATTTCTCAATGGTCTGACGGATTGGAGAGAGTTGTTATATTCTTATTTAATACTGGTGAGGAGGAGGGTCTCAATGGTGCTCATAGCTTCATAACCCAGCATCCTTGGAGCAAAACTATTCGTGTGGCTATTGATTTGGAGGCCATGGGCATTGGAGGGAAGTCTATTATTAATGACAAATTAGAGCTTTTGAAGACTGGATCTCTTCAACATCTGGGGGGAAATATGTTTGCTTTCCTGTTTCATATTGGGGCATCTTCTCATATTCCAGAAGGCAATTCCACTCAATCAGAGGAAGATATAAGCAAGAACAATGCCATATACTTTGACATTTTGTCACTTATAATATGGGTTACATCATTGGTTATGGGTGGTATACCAGCTGCAGCTTCGTTGGCCTTGTCGTGTTTGAGTGTTCTCCTCATGTAG 1668 0.4646 MLRLFFHNCMVGGCDTSILVTSNTFNKAERDAAVNLLLSGDGFDTVARAKAPSSLSALASPPVPTSWPWPHTISLLQSVAPPLISASVGKTPSNQKPLTLKTNSPYQPCLCQKLFNFNKNSEIDPAYNPDYAAGLKKLCQNYTKDPSMSAFNDVITPTKFDNMYYKNLRKGMGLLATDSAMFDDSRSRPFVDRYADDEKKFFQDFARAMEKLSVLQVKTEGKGEVRSSSSSEGSSSGEASEEESSSNGAEIRTTAYVGNPRRSSFVWLALLLIITYFCSSIYHYQFQSMPVPLTAEEAAGKRGFSEIETFKHVRALTQLGPHPVGSEALQYVLTACENIKKTALWEVDVMDIFHAKFGANHMRCGLFSGRTLVYSNLNSVLVRILPRYVSEEGSNLFWSLLILTCVMLELARGISQWSDGLERVVIFLFNTGEEEGLNGAHSFITQHPWSKTIRVAIDLEAMGIGGKSIINDKLELLKTGSLQHLGGNMFAFLFHIGASSHIPEGNSTQSEEDISKNNAIYFDILSLIIWVTSLVMGGIPAAASLALSCLSVLLM 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01189 555 Pfam Peptidase family M28 406 470 IPR007484 -
Gma18g01189 555 ProSiteProfiles Plant heme peroxidase family profile. 1 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g01189 555 Gene3D - 213 228 - -
Gma18g01189 555 Pfam Peroxidase 1 51 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g01189 555 Pfam Peroxidase 119 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma18g01189 555 SUPERFAMILY Heme-dependent peroxidases 1 228 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma18g01189 555 SUPERFAMILY Zn-dependent exopeptidases 404 493 - -
Gma18g01189 555 Gene3D Peroxidase, domain 2 112 212 - -
Gma18g01189 555 Gene3D - 1 57 - -
Gma18g01189 555 MobiDBLite consensus disorder prediction 223 249 - -
Gma18g01189 555 Gene3D Zn peptidases 403 510 - -
Gma18g01189 555 PANTHER METALLOPEPTIDASE M28 FAMILY MEMBER 228 470 IPR045175 GO:0006508|GO:0008235
Gma18g01189 555 PANTHER METALLOPEPTIDASE M28 FAMILY MEMBER 471 555 IPR045175 GO:0006508|GO:0008235
Gma18g01189 555 PANTHER 24 KDA VACUOLAR PROTEIN-LIKE 228 470 - -
Gma18g01189 555 PANTHER 24 KDA VACUOLAR PROTEIN-LIKE 471 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01189 Gma-Chr18 18349413 18362413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01189 1 226 Peroxidase AT3G28200 39.464 2.04e-54 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01189 - - gmx:100803587 406.757