Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01184 ATGGACTCTAACAGCGTCGTTTCTTGGCCGAGGATGCCAGAAAACATCAACGGTTTCGGCCTCAAACAGAACCAATCCGAAGAGGTTCATGTTTTAGCCGTTGATGACAGCACCGTTGATCGCAAAGTCATCGAACACTTGCTCAAAGTCTTAGCCTGTAAAGTTACTGCTGTGGATAGTGGGCTGAGAGCACTGCAATTGCTTGGACTATTGGACGAGCAGAAAATACCCTCTGAAACTAATGGTTTTGTGGGTTTGAAGGTAGATCTAATCATCACAGACTATTGTATGCCCGGAATGACCGGTTATGAATTACTCAAGAGAATCAAGGAATCATCTACTTTCAAGGAAACGCCTGTGGTTATTATGTCATCTGAAAACGTTTTGCCACGCATAGACAGATGTTTGGAGGAGGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCTGATGTGAAGCGTTTGAAGGATTACATGACAACAAAGGAGGTTAGGGGTGAATTAAGCCAAGAAGAGAGGGAAGGGATCAACAAGAGGAAGCTATTGGACACCTCTGATGTGTCGCCATCATCACCACCGTCCATTTCCTCATCACCACTTCCATCTTCACTCAGCTCAGTGATTGACTCTCCAATCAGACGGCTTAAAATGACCAACACTGATTGA 669 0.4469 MDSNSVVSWPRMPENINGFGLKQNQSEEVHVLAVDDSTVDRKVIEHLLKVLACKVTAVDSGLRALQLLGLLDEQKIPSETNGFVGLKVDLIITDYCMPGMTGYELLKRIKESSTFKETPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMTTKEVRGELSQEEREGINKRKLLDTSDVSPSSPPSISSSPLPSSLSSVIDSPIRRLKMTNTD 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01184 222 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 10 210 - -
Gma18g01184 222 MobiDBLite consensus disorder prediction 167 222 - -
Gma18g01184 222 CDD REC_typeA_ARR 31 156 - -
Gma18g01184 222 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 210 IPR045279 GO:0009736
Gma18g01184 222 Gene3D - 29 196 - -
Gma18g01184 222 SUPERFAMILY CheY-like 29 156 IPR011006 -
Gma18g01184 222 Pfam Response regulator receiver domain 31 153 IPR001789 GO:0000160
Gma18g01184 222 ProSiteProfiles Response regulatory domain profile. 30 161 IPR001789 GO:0000160
Gma18g01184 222 SMART REC_2 29 160 IPR001789 GO:0000160
Gma18g01184 222 MobiDBLite consensus disorder prediction 184 222 - -
Gma18g01184 222 MobiDBLite consensus disorder prediction 167 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01184 Gma-Chr18 18221286 18222709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01184 1 214 Response Regulator Gene Family AT1G59940 54.622 9.51e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma18g01184 Response_reg 5.3e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01184 K14492 - gmx:100527828 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01184 18 18221286 18222709 Gma18g01184 18 18221286 18222709 ECH
Gma01g00340 01 4052404 4053588 Gma18g01184 18 18221286 18222709 PCT
Gma02g00249 02 2505338 2506889 Gma18g01184 18 18221286 18222709 PCT
Gma18g01184 18 18221286 18222709 Gma01g00340 01 4052404 4053588 PCT
Gma18g01184 18 18221286 18222709 Gma02g00249 02 2505338 2506889 PCT