Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01182 ATGATGCTTCAATCATGGCCTTTTATGAGCCTTGTTTTTGTTTTACTTTTGCACAGTTTGTCAATAACACCATATTGTCATTGCCAAACCAGCAATTCTCCTCCTCAAAACATTGAAACTTTCTATCCTAATGGAACTTCAGCAACACAACAACCTTTGCCGCCACCACCACAGCCACAACAACCACCGCCACTTCCAACCGCTAACGTAGCACCTAGCCGCGGTTCATTGAACCATAACATAGCGACCGCGGTGGCTGCAACTGCGGCCAGCACCATAGTTGTTTGTGGTTTAATTTTCTTTTTGGTTCAAAGGTGCTTGAGGAAGAGAAGGAGAAGGAGAGAGGAGACAAGAAGTAACACTGCAACTGCTGATGGAGATACCCGAGTTGTGCCTCAGGGAAATGTGTTTGAGAGAATTGATGGGAATGTGAGGGGGTTGATCGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAGCTTGAAGGGAAGAACTCTAACAAGGATCTTCTACATAAGGAGGTTGTGAGTAGTCCTAGAAACAAAGAAAAAGCAGAACATGGTCATGATGAAAATCAAGTGAAGAAATCCAAGTCCATCCAAGTGGTTCCTCTGCTTAGAGGAAAATCTTCAACTTCTCACTTGAATGTATCTCCAGAAGAGGATGAGCCATATAGATTTTCGCCGCTTCCATCTCCTACTCCTTCAAGTCTTCCTGCATCAGCTGGGATTGTTATCAAGGATGTTCAGAAACCAGATTCTCCAACTCAACCATCAACTCCACCCCCTCCAATTTCACCCTCAACTCCATCATCCTCTGCTTCTTTTGCAGCAATTCCGAAAACGAATACTCCTGCACCGTCGCCTCCCCCTCTCCCAATCTCAGCTAGAAGGAGTCCAGCACCACCTCCTCCTCCTCCAGCATCATCAAAACCACCACCTGCTCCAATTGAAATGACAGCTATTAAGCAAAGAAACTCTTCAGGGAAAGGCATGCCAGAAACCAGCAATGATCAAGTGAAGCTGAAGCCTTTGCATTGGGATAAGGTGAATAGTAATAATGCTGATCACTCCATAGTTTGGGACAAAGTCGATCGTGGCTCTTTCAGGGTTGATCAAGATCTTATGGAAGCTCTCTTTGGTTATGTCGCAACCAACCGAAGATCTCCCAAAGGAAAGAGTCACTCAGCCATTCCCAGCAAGGATGGCTCAGCTTCTTCAGCAAAAACATTTCTTCTTGACCCTAGAAAATCACAGAACATTGCTATTGTTTTGAAATCTCTTGCAGTCTCACAAGGCGAAATTCTTGATACACTCATTGATGGTAAGGGCCTCAATGCAGATACCCTTGAAAAGCTTGCTAGAGTTTCCCCAACAGAAGAAGAGCAATCTCTTATCCTTCAATACAAAGGAGACCCAGCAAGACTTGCAGCAGCTGAATCATTCCTCTATAGCATCCTTAAAGCTGTTCCCTCGGCTTTCAAGCGCTTGAATGCCATGCTATTCAGGTTGAACTATGACTCAGAGATTCAAGAAATCAAGGAATCTCTGCAGACCATTGAACTGGGGTGTAACGAGCTTAAAAGCAAAGGACTCTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCAGGAAATCGAATGAATGCAGGAACTGCAAGAGGTAATGCTCAAGCTTTTTTCAATTTGGCTTCTCTAAGGAAGCTCTCTGATGTCAAGACCACCAATGGAAGAACGACATTACTTCACTTTGTGGTTGAAGAGGTAGTCCGTTTGGAGGGAAAACGGGTTTCTCTTAACCGCAATGGCAGCCTGAGCAGTAGCAGCAGTAGGAGCAACAGCAACAGCAATGGAAACTATGAGAACAACATTGCTTCAAATGAACTGATAGAAAGGGAATATGTAACATTAGGATTGCCAATTGTAGGAGGGATCAATTCTGAGTTATCCAATGTTAAGAAAGCAGCACAAATAGATTATAACAATTTAGTTGGTTCAATCTCGGCCCTCTCAACCCGGTTAGTTGAAATTCGAGAACTTGCTTCCTTGTGTGGAAATGGAGGAAATTTTGTGAAAGAAATGGATCATTTTCTGGGAAATGCAGAGGATGAGTTGAAATTAGTGAGGGACAAGCAAACAAGTGTGTTTCAGCTCATCAAGAAAACAACACAATACTATCAAGGAGGAGCCTCAAAAGAGACTGCAGAAGACAATCTTCAATTGTTTGTCATAGTGAAGGATTTCCTGGGAATGGTTGATCAAACTTGCACTGAGATTGCACGTGAGCATCAGAAGAGGAAACCTCCCAAGGCAATTTTTGGGTAG 2325 0.4353 MMLQSWPFMSLVFVLLLHSLSITPYCHCQTSNSPPQNIETFYPNGTSATQQPLPPPPQPQQPPPLPTANVAPSRGSLNHNIATAVAATAASTIVVCGLIFFLVQRCLRKRRRRREETRSNTATADGDTRVVPQGNVFERIDGNVRGLIVDEDGLDVIYWRKLEGKNSNKDLLHKEVVSSPRNKEKAEHGHDENQVKKSKSIQVVPLLRGKSSTSHLNVSPEEDEPYRFSPLPSPTPSSLPASAGIVIKDVQKPDSPTQPSTPPPPISPSTPSSSASFAAIPKTNTPAPSPPPLPISARRSPAPPPPPPASSKPPPAPIEMTAIKQRNSSGKGMPETSNDQVKLKPLHWDKVNSNNADHSIVWDKVDRGSFRVDQDLMEALFGYVATNRRSPKGKSHSAIPSKDGSASSAKTFLLDPRKSQNIAIVLKSLAVSQGEILDTLIDGKGLNADTLEKLARVSPTEEEQSLILQYKGDPARLAAAESFLYSILKAVPSAFKRLNAMLFRLNYDSEIQEIKESLQTIELGCNELKSKGLFVKLLEAVLKAGNRMNAGTARGNAQAFFNLASLRKLSDVKTTNGRTTLLHFVVEEVVRLEGKRVSLNRNGSLSSSSSRSNSNSNGNYENNIASNELIEREYVTLGLPIVGGINSELSNVKKAAQIDYNNLVGSISALSTRLVEIRELASLCGNGGNFVKEMDHFLGNAEDELKLVRDKQTSVFQLIKKTTQYYQGGASKETAEDNLQLFVIVKDFLGMVDQTCTEIAREHQKRKPPKAIFG 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01182 774 PANTHER FORMIN-RELATED 1 771 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma18g01182 774 MobiDBLite consensus disorder prediction 173 197 - -
Gma18g01182 774 ProSiteProfiles Formin homology-2 (FH2) domain profile. 333 774 IPR015425 -
Gma18g01182 774 MobiDBLite consensus disorder prediction 173 318 - -
Gma18g01182 774 SUPERFAMILY Formin homology 2 domain (FH2 domain) 303 767 - -
Gma18g01182 774 MobiDBLite consensus disorder prediction 601 620 - -
Gma18g01182 774 PANTHER FORMIN-LIKE PROTEIN 1 771 - -
Gma18g01182 774 SMART it6_source 330 767 IPR015425 -
Gma18g01182 774 MobiDBLite consensus disorder prediction 36 73 - -
Gma18g01182 774 MobiDBLite consensus disorder prediction 49 69 - -
Gma18g01182 774 MobiDBLite consensus disorder prediction 256 270 - -
Gma18g01182 774 Pfam Formin Homology 2 Domain 337 752 IPR015425 -
Gma18g01182 774 Coils Coil 511 531 - -
Gma18g01182 774 MobiDBLite consensus disorder prediction 205 219 - -
Gma18g01182 774 MobiDBLite consensus disorder prediction 284 315 - -
Gma18g01182 774 Gene3D Formin, FH2 domain 352 771 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01182 Gma-Chr18 18184744 18187170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01182 309 767 FH2 protein (formin) Gene Family AT1G70140 54.447 8.07e-161 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01182 - - gmx:100781860 1278.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01182 18 18184744 18187170 Gma18g01182 18 18184744 18187170 ECH
Gma01g00341 01 4067508 4070617 Gma18g01182 18 18184744 18187170 PCT
Gma02g00248 02 2491904 2494402 Gma18g01182 18 18184744 18187170 PCT
Gma18g01182 18 18184744 18187170 Gma01g00341 01 4067508 4070617 PCT
Gma18g01182 18 18184744 18187170 Gma02g00248 02 2491904 2494402 PCT