Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01164 ATGAAGGGATGGGATGGGATTCAATCTTCGTTCTCTTCTCGATCGAGTTCCACGTTGGGCCAACAACAACAACAACCTCCCTCGCGAACGGTTCGACTCGGCCGAGTTCAGCCTCAGGCTCCGACTCACCGCACCATCTTCTGCAACGATCGCGAGGCCAATCTTCCCATCCGATTCAAGGGGAATTCTATATCAACTACGAAATATAACTTCTTCACCTTTTTGCCAAAAGGATTATTTGAACAGTTCAGACGGGTGGCCAATCTCTACTTTCTTATGATCTCAATTTTGTCAACCACACCAATTAGTCCTGTGTCTCCAATAACTAATGTGCTTCCTCTATCTCTGGTGCTTCTTGTCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAAAATGACATGTCTGTAAACAATAATACAATAGATGTTTTGCAAGATCAAAAGTGGGGGTCTATACCCTGGAAAAAGTTGCAGGTTGGAGACCTTGTTAAGGTTAAGCAGGATGCATTCTTTCCTGCAGATCTGCTTTTCTTGGCTAGCACTAATGCAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGGGAAACAAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACGTGACTCCAGAGAAGGCATCTGAGTTTAAAGGTGAAATTCAATGTGAACAACCAAACAATTCATTGTATACCTTTACTGGAAATCTTATAACTCAAAAGCAAACACTGCCTCTCAGTCCAAATCAAATTTTGTTGCGGGGTTGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTTATATTTACAGGACATGAAACAAAGGTGATGATGAATACAATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAACTTGACAAGCTCATACTAACTCTATTTGCAACTCTCTTTGTGATGTGTTTCATTGGAGCCGTAGGCAGGCGAGTTTTTCTCCTAACTATGTTTACCCTAATCACACTATACTCGACTATCATTCCCATTTCACTTTATGTGTCCATAGAGATGATAAAATTTATTCAGTCAACTCAATTTATCAACAAGGACTTGTGCATGTACCATAATGAAACCAATACACCTGCATTGGCCAGAACTTCAAATCTGAATGAAGAACTTGGGCAGGTGGAATACATTTTCTCTGACAAAACTGGGACTCTGACAAGAAATTTGATGGAGTTCTTTAAGTGTTCAATTGGAGGAGAGGTCTATGGAAATGGTGTGACTGAAATTGAGAGAGGATTAGCAGAGCGTAATGGAATGAAGATTGAGGAAAATAGATCTCCCAATGCAGTGCACGAGAGGGGTTTTAATTTTGATGATGCTAGGATTATGAGAGGAGCTTGGAGGAATGAACCGAATCCTGATGTCTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTGCCTGAGGGTGATGAGTCCCCTGAAAAGATCAGATATCAAGCTGCATCACCAGATGAGGCTGCTTTGGTTATTGCTGCAAAACACTTTGGTTTCTTTTTCTACAGACGCACACCTACAATGATATATGTTCGTGAATCTCATGTTGAGAAAATGGGCAAAGTTCAAGATGTGTCTTATGAGATTTTAAATGTGCTCGAGTTTAATAGTACAAGGAAGCGTCAGTCTGTTGTTTGTCGTTATCCTGATGGAAGGCTTGTACTATACTGTAAGGGTGCTGATAATGTAGTCTATGAGAGACTAGCTGATGGTAATAATAATATCAAGAAAGTCACCAGGGAGCATTTGGAACAATTTGGATCTGCTGGATTACGCACCTTATGCCTAGCCTACAAAGAATTGCATCCTGATGTTTATGAAAGCTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTCTAAATGATCGTGAAAAGAAATTGGATGAGGTGGCAGAACTTATTGAAAATGATCTCATTTTAATTGGTAGCACAGCCATTGAAGACAAGCTTCAAGAGGGAGTACCAGCTTGCATAGAGACTCTGCAAAGAGCTGGTATTAAAATTTGGGTTCTTACAGGGGACAAGATTGAAACAGCGATAAACATAGCCTATGCATGCAACTTGATAAACAATGAGATGAAGCAATTTGTTATTAGTTCAGAAACTGATGCAATTAGAGAAGTTGAAGACAGGGGTGACCAAGTGGAAATTGCACGGTTTATTATAGAAGAAGTGAAAAGAGAACTGAAGAAATGCCTCGAGGAAGCACAGAGCTCCTTTCAGTCCCTATCTGGACCAAAATTAGCACTTGTAATTGATGGAAAATGTCTAATGTATGCATTGGATCCAAGTTTGAGAGTGATGCTGCTGAATCTAAGTTTGAATTGTCACGCTGTAGTTTGCTGCCGAGTTTCTCCTTTACAGAAAGCACAGGTCACGAGTATGGTCAAGAAAGGTGCACAAAAAATTACACTTAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGCGTTGGCATAAGTGGGATGGAGGGAATGCAAGCTGTGATGGCCAGCGATTTTGCCATTGCACAGTTCCGTTACCTTGCAGATTTGCTTCTTGTTCATGGCCGATGGTCATATTTGCGAATATGCAAGGTTGTGATATACTTCTTTTACAAGAACCTCACCTTCACTCTTACTCAGTTTTGGTTTACATTTCAAACTGGGTTTTCTGGTCAGAGATTCTATGATGATTGGTTTCAGTCATTATATAATGTTATCTTCACAGCACTTCCTGTAATCATTGTTGGATTATTTGACAAGGATGTCAGTTCATCTCTATCCAAGAAATATCCTGAACTATACATGGAAGGAATAAGAAATGTTTTCTTCAAATGGAAAGTTGTGGCCATATGGGCTTTCTTTTCTGTATACCAGTCTCTAATATTCTTCTATTTTGTGAGTACTACAAATTTAAGTGCTAAAAACTCAGCAGGCAAGGTATTTGGACTCTGGGATGTCAGTACAATGGCCTTCACTTGTGTTGTAATAACCGTCAACTTGCGACTGCTTATGATTTGTAATTCGATCACTAGATGGCACTATATTAGTGTTGGTGGAAGTATATTAGCCTGGTTTATTTTTATTTTTATATATTCAGGGATTAGCACTCCTTATGATCGTCAGGAGAATATTTATTTTGTCATATATGTCTTGATGAGTACATTCTACTTCTATGTCATGCTACTTCTAGTTCCTATTGCTGCACTTTTCTGTGACTTTGTTTACCAAGGGGTTCAAAGATGGTTCTTCCCCTATGATTATCAGATTATTCAAGAAATGCATAGAGATGAGGTAGATAGCACTGGTAGAGCACAGCTGCTGGAGATAGGGAACCAGCTTACACCAGCTGAGGCAAGGAGTCATGCTATATCTCAACTCCCACGCGAAATATCAAAGCACACTGGGTTTGCTTTTGATTCACCTGGGTATGAATCCTTTTTTGCCTCACAGCTCGGTGTATATGCTCCACCCAAGGCATGGGATGTAGCAAGAAGAGCTAGCATGAGATCACGGCCAAAGATTGGGCAGCAAAAATAA 3597 0.402 MKGWDGIQSSFSSRSSSTLGQQQQQPPSRTVRLGRVQPQAPTHRTIFCNDREANLPIRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLMISILSTTPISPVSPITNVLPLSLVLLVSLIKEAFEDWKRFQNDMSVNNNTIDVLQDQKWGSIPWKKLQVGDLVKVKQDAFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWDYVTPEKASEFKGEIQCEQPNNSLYTFTGNLITQKQTLPLSPNQILLRGCSLRNTEYIVGVVIFTGHETKVMMNTMNVPSKRSTLERKLDKLILTLFATLFVMCFIGAVGRRVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLCMYHNETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGNGVTEIERGLAERNGMKIEENRSPNAVHERGFNFDDARIMRGAWRNEPNPDVCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKHFGFFFYRRTPTMIYVRESHVEKMGKVQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADNVVYERLADGNNNIKKVTREHLEQFGSAGLRTLCLAYKELHPDVYESWNEKFIQAKSSLNDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFVISSETDAIREVEDRGDQVEIARFIIEEVKRELKKCLEEAQSSFQSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSMVKKGAQKITLSIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSSSLSKKYPELYMEGIRNVFFKWKVVAIWAFFSVYQSLIFFYFVSTTNLSAKNSAGKVFGLWDVSTMAFTCVVITVNLRLLMICNSITRWHYISVGGSILAWFIFIFIYSGISTPYDRQENIYFVIYVLMSTFYFYVMLLLVPIAALFCDFVYQGVQRWFFPYDYQIIQEMHRDEVDSTGRAQLLEIGNQLTPAEARSHAISQLPREISKHTGFAFDSPGYESFFASQLGVYAPPKAWDVARRASMRSRPKIGQQK 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01164 1198 Pfam Cation transport ATPase (P-type) 492 586 - -
Gma18g01164 1198 PRINTS P-type cation-transporting ATPase superfamily signature 395 409 - -
Gma18g01164 1198 PRINTS P-type cation-transporting ATPase superfamily signature 826 845 - -
Gma18g01164 1198 SUPERFAMILY Calcium ATPase, transduction domain A 141 285 IPR008250 -
Gma18g01164 1198 Pfam Phospholipid-translocating ATPase N-terminal 46 110 IPR032631 -
Gma18g01164 1198 Pfam E1-E2 ATPase 140 352 - -
Gma18g01164 1198 Gene3D - 124 289 - -
Gma18g01164 1198 CDD P-type_ATPase_APLT_Dnf-like 61 986 - -
Gma18g01164 1198 SFLD p-type atpase 377 877 IPR044492 -
Gma18g01164 1198 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 327 1194 - -
Gma18g01164 1198 MobiDBLite consensus disorder prediction 1 38 - -
Gma18g01164 1198 ProSitePatterns E1-E2 ATPases phosphorylation site. 397 403 IPR018303 -
Gma18g01164 1198 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 25 324 - -
Gma18g01164 1198 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 401 673 IPR023299 GO:0000166
Gma18g01164 1198 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 269 417 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma18g01164 1198 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 799 905 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma18g01164 1198 SUPERFAMILY Calcium ATPase, transmembrane domain M 58 1104 IPR023298 -
Gma18g01164 1198 SFLD Haloacid Dehalogenase 377 877 - -
Gma18g01164 1198 MobiDBLite consensus disorder prediction 1 32 - -
Gma18g01164 1198 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 25 324 - -
Gma18g01164 1198 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 327 1194 - -
Gma18g01164 1198 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 59 1112 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gma18g01164 1198 Gene3D - 659 866 IPR023214 -
Gma18g01164 1198 Pfam Phospholipid-translocating P-type ATPase C-terminal 854 1104 IPR032630 -
Gma18g01164 1198 Gene3D - 524 658 IPR023299 GO:0000166
Gma18g01164 1198 SUPERFAMILY HAD-like 383 868 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01164 Gma-Chr18 17390909 17451461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01164 10 1197 Primary Pumps ATPases AT1G59820 79.555 0.0 2062
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01164 K14802 - gmx:100815547 2340.46