Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01149 ATGGAGGTTGCCAATTTCTCCAATGATGAAGTCTCTGCTCCCTACAACCTTGATTTCTCGGACTCACCAATACCACATAACTATGACGAGGAAGAATTGTTTGGATGCCAAGGCCACGGAGGATTTCTCAAGACAGCTGCCGCTGCTCCTATTCATCTTCAAAAGCAAGCTCACCTTCTCAATGTGAATTGCCCTGATGATGACACCATTGGATTGGGTACTCCAAGTGTCCCTCCCATCATTGATTATGATTTTCCATTGGAGAAGAATTCAGAATGCTCCCTAGGGAACGAACCAACTGACCCTCATGGGTCTTGGCCTTCAAGGGAATCTCTAGATTATGATGGCACAAAAAGTGAGACTTCCATTGAACAAAAACCCAAGCCCAAGACTGTTGCTAAACCCACTGTCGTTGAGCTTGCTCAAAGTGGCTACAAGAGTGTGGGAATCTTGCTTGAAATGGTACTAGGGAATTACTACGATTGTGATTATGCGGCTTCTATTTATGGGCTAAATGAGGAGAGGTCATTTTGTTGGGTCTTGAGGAGCTTTAGTTTTGGTGGTTTTCAGGATACTAGCTCAACTTTGTTTGTAAAGTTCAGAGCAAATGGATCATGGACTTCAGATGGCCAAGCAGGAGGGTCTAATAGCTCCTCCGATGGAATGGGAAGTGCAAAGGAGAAGCCTGTGATTATTCCTATTGTTCTCAGCATGGTAGTTCTTATTGTTTTGCTGAGTTTATTATTGCTTCTCGTTTATGAGTTCATGAAAAAAGGATCCTTGGATAAATGGATCTTCCCTTCATATCAAGGTCGAGATAGATTGTTAGATTGGACAACTCGTTTAAATATAGCCATAGCTATTGCACAAGGGATTGCATACTTTCATGAGCAGTGTAGGGATCGGATAATACATTGTGAAATCAAACCGGAAAATATATTGGTAGACGAAAACTTTTGTCCCAAAGTATCTGATTTTGGGCTGGCCAAATTGATGGGAAGGGAGCACTCTCATGTGGTCACAATGGTCAGAGGCACTAGAGGTTATTTGGCACCAGAATGGGTTAGTAATCGCCATATAACTGTAAAAGCTGGCGTTTACAGCTATGGAATGCTTCTTTTAGAGATCATTGGTGGCAGGAGAAATCTTGACATGTCCTTTGGTGCTGAGGACTTTTTCTATCCTAGTTCGGCTTACAAGGTACATTAA 1209 0.4243 MEVANFSNDEVSAPYNLDFSDSPIPHNYDEEELFGCQGHGGFLKTAAAAPIHLQKQAHLLNVNCPDDDTIGLGTPSVPPIIDYDFPLEKNSECSLGNEPTDPHGSWPSRESLDYDGTKSETSIEQKPKPKTVAKPTVVELAQSGYKSVGILLEMVLGNYYDCDYAASIYGLNEERSFCWVLRSFSFGGFQDTSSTLFVKFRANGSWTSDGQAGGSNSSSDGMGSAKEKPVIIPIVLSMVVLIVLLSLLLLLVYEFMKKGSLDKWIFPSYQGRDRLLDWTTRLNIAIAIAQGIAYFHEQCRDRIIHCEIKPENILVDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVSNRHITVKAGVYSYGMLLLEIIGGRRNLDMSFGAEDFFYPSSAYKVH 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01149 402 MobiDBLite consensus disorder prediction 113 127 - -
Gma18g01149 402 Pfam Protein kinase domain 249 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01149 402 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 250 400 - -
Gma18g01149 402 MobiDBLite consensus disorder prediction 92 131 - -
Gma18g01149 402 ProSiteProfiles Protein kinase domain profile. 145 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01149 402 SUPERFAMILY Protein kinase-like (PK-like) 248 386 IPR011009 -
Gma18g01149 402 Gene3D Transferase(Phosphotransferase) domain 1 256 397 - -
Gma18g01149 402 PANTHER OS07G0415500 PROTEIN 250 400 - -
Gma18g01149 402 PANTHER OS07G0415500 PROTEIN 143 249 - -
Gma18g01149 402 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 143 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01149 Gma-Chr18 17134247 17138394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01149 251 383 Receptor kinase-like Gene Family AT5G20050 52.555 7.20e-42 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma18g01149 Pkinase 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01149 - - gmx:102670544 348.591