Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01133 ATGGTTGGTGTCGGTGTTCGTGATAATCCAAATCGGGGTTTTCATCGCCACCATGCCCGTCCACGATTTCTAGAACAATTCTCACGGCGATTGCGTTCTTCAAGCCCTCGGAAGTTGCTTGAGTACCATCTTCTTACTCTGGTGTGTCACATTTTGATACTGTTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAATCTCCACCTCGCATTCCAGAATTTCATCTTCCAGAGGAGCCATTCCTGCAAGTTGTGTCTGCATTGAGAATTGAAATCAACGGGGGATTTGCCGTTTTGCATAGTATTGGCTCTGGAAGGGACTTGACGAAATTCCTAGTGGTGTGTGACCTCAAACGTATTTGTGAGACTGATCTAGGACTTGCTTCACAATGTTGCTTAACTAAGCATGTCTTCAAAATGAGCAAGCAGTACCTTGCAAATGTTGCTTTGAAAATTAATGTCAAAGTTGGAGGGAGAAACACTGTACTGGTTGATGCGCTCTCTCGACGCATTCCCTTGGTCAGTGACAGACCTACAATTATTTTTGGAACCGATGTGACTCATCCACATCCTGGAGAGGATTCAAACCCATCAATTGCAGCAATAACTCATAGGCAGGAACTCATCCAGGATCTTTTCAAACAATGGCAAGATCCAGTTAGAGGAAGAGTGACTGGTGGAATGATCAAGGAACTTCTTATATCTTTTAGGAGAGCTATAGGACAAAAGCCCCAATGCATCATATTTTATAGTATTTTATTATCTATTTTATGTGATAATGGTTTTCAAATATCATGTGCAGGGATGGTGTTAGTGAGGGTCAATTTTAACAGGTTCTACTATTTGAGCTTGATGCTATTCGAAAGGCATGTGCATCCCTGGAACCCAACTATCACGATAAGAGTTCTGTTGACAGGAGTGGCAACATATTGCCTGGTACTGTTGTTGACTCCAAAATCTGCAATCCCACCGAATTTGACTTTTATCTCTGCAGCCATGTTGGAATACAGGATAGTACCGATGTGGAAAACGTTGTCTTTCTACAACGATGGTTTAGGGACCGACGCTGAAATTTTTAACTTTCAACATCGGTTGACCACCGATGTAGAATGTGGTTTTCCACTGATGTAG 1146 0.4258 MVGVGVRDNPNRGFHRHHARPRFLEQFSRRLRSSSPRKLLEYHLLTLVCHILILLLAVLFLWSNAHTFIHKSPPRIPEFHLPEEPFLQVVSALRIEINGGFAVLHSIGSGRDLTKFLVVCDLKRICETDLGLASQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGTDVTHPHPGEDSNPSIAAITHRQELIQDLFKQWQDPVRGRVTGGMIKELLISFRRAIGQKPQCIIFYSILLSILCDNGFQISCAGMVLVRVNFNRFYYLSLMLFERHVHPWNPTITIRVLLTGVATYCLVLLLTPKSAIPPNLTFISAAMLEYRIVPMWKTLSFYNDGLGTDAEIFNFQHRLTTDVECGFPLM 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01133 381 ProSiteProfiles Piwi domain profile. 121 208 IPR003165 GO:0003676
Gma18g01133 381 Gene3D - 175 260 IPR036397 GO:0003676
Gma18g01133 381 ProSiteProfiles Reticulon domain profile. 39 119 IPR003388 -
Gma18g01133 381 PANTHER PROTEIN ARGONAUTE 1A 120 255 - -
Gma18g01133 381 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 120 255 - -
Gma18g01133 381 Gene3D - 116 172 - -
Gma18g01133 381 Pfam Reticulon 39 119 IPR003388 -
Gma18g01133 381 SMART Piwi_a_2 115 340 IPR003165 GO:0003676
Gma18g01133 381 Pfam Piwi domain 121 255 IPR003165 GO:0003676
Gma18g01133 381 SUPERFAMILY Ribonuclease H-like 122 255 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01133 Gma-Chr18 16641122 16645448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01133 121 255 Eukaryotic Initiation Factors Gene Family AT1G48410 75.325 3.08e-70 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01133 K11593 - gmx:100778754 248.054