Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01121 ATGGAGCTTGCACCTGTGAAGTCTGAACTAAGTCCAAGGAGCCATAGGTTGGTCATTATAGATGGTAGTGATGTTATTAGCACTAAGTGTGCCAAAAGGCGGCGAAGAGATTCGTCTATGGCCGTGTTAGGTGGCAATGGACAACAAGGTGAACAGTTAGAAGAACAGAAGCAACTTGGTGGCCAATCAACTGCCACCACTGTGAAGAGAAGCTCAAGGTTCAGGGGAGTTAGCAGCAGACACAGGTGGACTGGAAGGTTTGAAGCACATCTATGGGATAAAGGGACCTGGAATCCCACTCAGAAGAAGAAAGGAAAGCAAGGAGCTTATAATGATGAAGAAGCTGCTGCTAGAGCTTATGATTTGGCTGCACTCAAGTACTGGGGAACATCAACTTTCACAAATTTCCCTGTATCTGATTATGAGAAAGAAATTGAGATAATGAAAACTGTAACCAAAGAAGAATACCTTGCTTCATTGAGGAGGAGGAGCAGCGGTTTTTCTAGAGGTGTATCAAAGTATAGAGGAGTAGCAAGGCATCATCACAATGGAAGATGGGAAGCAAGGATTGGGAGAGTGTTCGGCAACAAGTACCTCTACCTTGGGACTTACAGTACACAAGAAGAAGCAGCCCGTGCATATGACATTGCAGCAATTGAATACAGAGGCATAAATGCAGTGACAAATTTTGACTTGAGCACCTACATCAGATGGCTAAGACCAGGAACACATCCTACTGCTTCTCATGATCAAAAGCCTAGCACTGATGCTCAACTTTTTGCAACCTCTAACTCCATGCAAACAAGAGGGAACATTGAGGTATCCAACTCCAACATGCATTCATTCCCCTCAGGTGAATTGGACAGTACCAAGAAGCGAGACTTTTCCAAGTACATGAACCCTTTGAGTCCTTGCAACAAGCCATCTTCCCCAACAGCATTAGGACTTCTCCTAAAATCCTCGGTGTTTAGAGAACTGATGCAGAGAAATCTGAACTCTTCTAGTGAAGAAGCTGATGTTGAATTGAAATATCCACAAGAGGGCAATGATGGGGTTGGAGGGATTTATGATAATGACAACACCAGTAACTCTTACTTTTGCTCTTCTAATATCAGCAGATTACCTAACTTGGAGTCATCAGAAGAGTGTCCATTGCCTATGTATCATGGAACTATGCAATCACTATGGAATAGTGCTTTCAACATGTCTAACTGA 1215 0.4329 MELAPVKSELSPRSHRLVIIDGSDVISTKCAKRRRRDSSMAVLGGNGQQGEQLEEQKQLGGQSTATTVKRSSRFRGVSSRHRWTGRFEAHLWDKGTWNPTQKKKGKQGAYNDEEAAARAYDLAALKYWGTSTFTNFPVSDYEKEIEIMKTVTKEEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYIRWLRPGTHPTASHDQKPSTDAQLFATSNSMQTRGNIEVSNSNMHSFPSGELDSTKKRDFSKYMNPLSPCNKPSSPTALGLLLKSSVFRELMQRNLNSSSEEADVELKYPQEGNDGVGGIYDNDNTSNSYFCSSNISRLPNLESSEECPLPMYHGTMQSLWNSAFNMSN 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01121 404 MobiDBLite consensus disorder prediction 42 73 - -
Gma18g01121 404 ProSiteProfiles AP2/ERF domain profile. 73 137 IPR001471 GO:0003700|GO:0006355
Gma18g01121 404 MobiDBLite consensus disorder prediction 36 73 - -
Gma18g01121 404 SUPERFAMILY DNA-binding domain 72 139 IPR016177 GO:0003677
Gma18g01121 404 Gene3D AP2/ERF domain 172 233 IPR036955 GO:0003700|GO:0006355
Gma18g01121 404 Gene3D AP2/ERF domain 72 139 IPR036955 GO:0003700|GO:0006355
Gma18g01121 404 ProSiteProfiles AP2/ERF domain profile. 173 231 IPR001471 GO:0003700|GO:0006355
Gma18g01121 404 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 398 - -
Gma18g01121 404 SUPERFAMILY DNA-binding domain 172 233 IPR016177 GO:0003677
Gma18g01121 404 CDD AP2 172 233 IPR001471 GO:0003700|GO:0006355
Gma18g01121 404 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 398 - -
Gma18g01121 404 Pfam AP2 domain 172 223 IPR001471 GO:0003700|GO:0006355
Gma18g01121 404 Pfam AP2 domain 73 129 IPR001471 GO:0003700|GO:0006355
Gma18g01121 404 SMART rav1_2 73 143 IPR001471 GO:0003700|GO:0006355
Gma18g01121 404 SMART rav1_2 173 237 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01121 Gma-Chr18 16335379 16337951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01121 69 235 AP2-EREBP Transcription Factor Family AT5G57390 67.647 2.90e-77 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gma18g01121 AP2 2.3e-06 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01121 - - gmx:100798483 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01121 18 16335379 16337951 Gma18g01121 18 16335379 16337951 ECH