Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01118 ATGCCAAAAAGAAATTGTATCTATTTTTGGAAAGAATACTCTATGGAAGCTAAGCAGAGTGAAGAAATTAATGGCAACAAGGATCATAATAAGCTTAAAAGGGAAATGGGAGAGGTTGGAGAAGGAAACGATAACTTGAAACTTTCATTGGCAAAGCTTGTAAAGGATTCAACTAGCGATGAAGAAAGTGAACTTGTTTCCCTTTCTCTTGGAATTTCATCCACAGGCCAACATGAGATGAAGAAAAAGAAGAATAGAAATGAAAAGATGAGAGAAAATGAGGATTTGAAAGATATACTTGCACTTGGATTAGATATCAGATTTGACTCTTCAGCTATAAAAAATCTAAGCACTGAAAGTAGTTGTGATGGGGAAAGGAAGGATGAGGAACTTTCAGAGACATGGCCACCAAGTAAAGTTGTCAAGACAATTATGAGAACTAGAGATAAAAGTGAAGTTTCTCAACATGCTGAACTCAAGAAGGCCAGGGTTTGTATCAGAGCGAGATGTGATACCCTAACGATGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAAATGGCAAAAGGGAATCCGTGCCCTCGAGCATACTATCGATGCACTGTTTCTCCATCTTGTCCTGTGAGAAAACAGGTTCAAAGATGTGCTGAAGACATGTCAATCTTGATTACCACCTATGAAGGAACTCACAACCACCCACTTCCTACTTCAGCCACTACCATAGCCTACACAACTTCTGCAGCAGCTTCCATGCTTCAGTCTCCTTCATTGAGCTCACAACTAGGACCAGCCAATTCAGATACGGTCCCTCTCATCAATTCTAGCGTTGCTTATAACCTTAATGCCCTAAACTTCACATCATCAAGCTATGATCAGCAGTTTTCAAAATCATCACAACACTTGTACTTCCACAACTCATCTATTTCAACCTCTAATTCTCACCCCACAATCACTCTTGACCTCACCTCACCTCAAACTTCACCTCATGTTGGAAAGTTCACCCCAGGCTTGTCTTTCATACCAAAACATTCATCAACAAATCTTCATTTTTCCTCAAGTACTTTCTCTCCTTTGCAATCAAGCATGCTACAGTCACCTTGGAGTCCTTATGGTGATTGCTTCAACTATGAGGGATTGATCACCCAAAATAGTAACCAAAATGGTTTCCTTACTAAGACTGGAAAACAACCATTTCAGGGGCATCTTTATCAACCCAATTACATTAGCAACCGTGTCATTTCTCAACAACCTTTACCTGATTCTGTTGTAGCTGCAACCAAGGCAATCACGGCTACCCCAAAATTTCAATCTGCAATAGCAGCTGCACTCACAGCATATGTTGGTAATGGGGTTAGAGAAAATCATGTTGGG 1374 0.4025 MPKRNCIYFWKEYSMEAKQSEEINGNKDHNKLKREMGEVGEGNDNLKLSLAKLVKDSTSDEESELVSLSLGISSTGQHEMKKKKNRNEKMRENEDLKDILALGLDIRFDSSAIKNLSTESSCDGERKDEELSETWPPSKVVKTIMRTRDKSEVSQHAELKKARVCIRARCDTLTMNDGCQWRKYGQKMAKGNPCPRAYYRCTVSPSCPVRKQVQRCAEDMSILITTYEGTHNHPLPTSATTIAYTTSAAASMLQSPSLSSQLGPANSDTVPLINSSVAYNLNALNFTSSSYDQQFSKSSQHLYFHNSSISTSNSHPTITLDLTSPQTSPHVGKFTPGLSFIPKHSSTNLHFSSSTFSPLQSSMLQSPWSPYGDCFNYEGLITQNSNQNGFLTKTGKQPFQGHLYQPNYISNRVISQQPLPDSVVAATKAITATPKFQSAIAAALTAYVGNGVRENHVG 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01118 458 SUPERFAMILY WRKY DNA-binding domain 169 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma18g01118 458 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 8 452 IPR044810 GO:0003700
Gma18g01118 458 PANTHER WRKY TRANSCRIPTION FACTOR 72B 8 452 - -
Gma18g01118 458 ProSiteProfiles WRKY domain profile. 170 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g01118 458 Gene3D WRKY domain 160 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma18g01118 458 Pfam WRKY DNA -binding domain 176 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma18g01118 458 SMART WRKY_cls 175 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01118 Gma-Chr18 16214826 16219400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01118 57 458 WRKY Transcription Factor Family AT5G15130 39.387 7.57e-61 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma18g01118 WRKY 2.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01118 - - gmx:102666229 871.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01118 18 16214826 16219400 Gma18g01118 18 16214826 16219400 ECH
Gma18g01118 18 16214826 16219400 Gma06g01704 06 17151477 17156609 ECH
Gma18g01118 18 16214826 16219400 Gma04g01680 04 45770569 45776711 ECH
Gma18g01118 18 16214826 16219400 Gma05g00281 05 2533087 2538635 ECH
Gma18g01118 18 16214826 16219400 Gma17g00922 17 7867378 7873082 ECH
Gma18g01118 18 16214826 16219400 Gma19g00181 19 2218178 2221556 ECH