Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01116 ATGAAGATCTTGTGGCTTTGTTTCAGTTACTTGTTTCCTGCAATCATTCTTGTTCTGCTTACTCCTTCCTCAGTTGCACAGCTATCACCAAGTGAGGGTAGAATTCTATTCCAAGTTCAGAAGCTTCTTGAGTATCCTCAAGCTCTTCAAGGGTGGACAAGATGGACCAACTTGTGCTTCCTCCCTCCCTCACCTTCCCTCAAGATTGTTTGCTCCAATGGTCATGTCACAGAACTTACAATCATTGGAAACAAGACCTCTCCATCTTCACACAACCCCAAAGCAGGTGCTTGGACTTCCCTTCAGACACTGTCTGAAAGATTCTCCATTGACTCTTTCTTCACTGTCATGACAAAGCTTTCAAATTTGAAGGTGTTGTCCTTGGTGTCTTTGGGTTTGTGGGGTCCTTTACCAGCCAAGATCAACAGGTTTTGGTCCTTGGAAGTGCTTAACATTAGCTCAAATTTCATTTATGGGGGAATTCCACAATCTCTATCCTCTATGAGGAATCTAAGGAGTCTTGTTTTGGTTGATAATCTCTTCAATGGAAGTGTTCCTGACCTCCAAAGGCTAACTTCTCTAGAAGAGCTCAACTTGGGAGGCAATAATTTGGGTGCTCAATTCCCTTCAGTGGGAAAGAATCTTGTCACTATTATGTTGAGAAATAATTCACTGAGATCTCATATCCCTCCACAACTTGTGCACTTTGATAAACTTCAGGTATTTGATGTGTCTTCCAATAATTTTTTTGGAAACATCCCATCCTTTTTGATCTCTTTGCCTTCCCTTCAGTACCTAAACTTGGCTTCAAACCATCTAAGTGGTAACCTCTCAGTGAATATGGCATGTAGTTCTTCACTAACATTTGTGGATATCTCACACAACCTTCTGGTTGGAAAATTGCCATCCTGCTTTGGTTCAGTGTCTTCAAAGGCCAAAGTGCTATATTCTGGGAACTGTTTGTCAACCGAAAAAAGGTTAAATGATCAACAGCATCCATTTTCTTTTTGCAAGAGAGAGGGGGCTTTGGCTGTTAAGCCTCCAGCTAAAAATCTGAAGAAGGAATCGGGTTCGGGTGCAAAACTAGGCCTAATGCTTGGAATAATTGTAGGAATTGTACTAATTGGAGGACTTCTGGTACTACTTGTTGTGTGCATCTTTAGGAAGTCCAAAGCAGAAAGATCACATCCTAAAATGGACAAATCTGTTGCTAATAAATATTCTATCAGTGTATCCCCCAGACCAATTGGTACAAGACATATTCCACAGGCAATGAAGCAAGCTGCAGTTGGACTGCCACCATACCGTATCTTCACATCAGAGGAAATTGAAGATGCAACAAATAACTTTGACCCATCAAATTTAATAGAAGAGGGATCACTGGGACAGCTATATAAAGGTTGGCTCAGAGATGGTTCAGTGGTCCTTGTTAATTGTGTAAAAATAAAGCAGAAAGGTTTGCCCCACAGCATCATGCAGCAAGTAGAGGTATTACACAATTTGAGGCACAGGCATATGGTGAGTGTTCTAGGACACTGCATCATTACTGAACAGGAGCATCCCCAAACAACAAGCACAGTCTTCATTGTGTTTGAGTACATCTCAAATGTGTCATTGAGGGATCAACTTTCAGATGGGAGAAAGAGGGAAATGCTGAAATGGCCACAAAGAATGGCAATGAGCATAGGCATTGCAAGAGGAGTTCAATTCTTACACACAGGAGTTGCTCCTGGCATATATGGCAACAATTTAAAGATTGAGAACATTCTGTTGGATGATAGTCTCAATGCAAAAGTCAGTAGATACAACATTCCATTGCCATCCAAGATTGCACATATTGAACAAAATGCCACCAATCATATTGGCAGCACAAACGATGCAGAAAAGGAAGATATCTATCAGTTGGGTATTATTCTACTTGAAGTTATCACTGGCAAACAAATTACATCCTCGAGTGAAATAGAGGAGCTGAAGGAAGAGCTGGAGAATGGTTCATCAGAAGCAACATCAGTAATTAGAAGCGCAATTGATCCTTCACTGAGGGGAACTTATGCATATGAATCAATGAAAACTGCAGTTCAGATCACCATCAACTGTCTCTCCAAGGTTTCTAGTCAGCGCCCTTCAATAGAGGATGTTCTTTGGAATTTGCAGTACGCAATGCAAGTTCAAGAGTCCTGGACCAGCAGTGGAAACCTCAGCACAAAATTGTAA 2214 0.4124 MKILWLCFSYLFPAIILVLLTPSSVAQLSPSEGRILFQVQKLLEYPQALQGWTRWTNLCFLPPSPSLKIVCSNGHVTELTIIGNKTSPSSHNPKAGAWTSLQTLSERFSIDSFFTVMTKLSNLKVLSLVSLGLWGPLPAKINRFWSLEVLNISSNFIYGGIPQSLSSMRNLRSLVLVDNLFNGSVPDLQRLTSLEELNLGGNNLGAQFPSVGKNLVTIMLRNNSLRSHIPPQLVHFDKLQVFDVSSNNFFGNIPSFLISLPSLQYLNLASNHLSGNLSVNMACSSSLTFVDISHNLLVGKLPSCFGSVSSKAKVLYSGNCLSTEKRLNDQQHPFSFCKREGALAVKPPAKNLKKESGSGAKLGLMLGIIVGIVLIGGLLVLLVVCIFRKSKAERSHPKMDKSVANKYSISVSPRPIGTRHIPQAMKQAAVGLPPYRIFTSEEIEDATNNFDPSNLIEEGSLGQLYKGWLRDGSVVLVNCVKIKQKGLPHSIMQQVEVLHNLRHRHMVSVLGHCIITEQEHPQTTSTVFIVFEYISNVSLRDQLSDGRKREMLKWPQRMAMSIGIARGVQFLHTGVAPGIYGNNLKIENILLDDSLNAKVSRYNIPLPSKIAHIEQNATNHIGSTNDAEKEDIYQLGIILLEVITGKQITSSSEIEELKEELENGSSEATSVIRSAIDPSLRGTYAYESMKTAVQITINCLSKVSSQRPSIEDVLWNLQYAMQVQESWTSSGNLSTKL 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01116 737 Gene3D Transferase(Phosphotransferase) domain 1 534 733 - -
Gma18g01116 737 Pfam Leucine Rich Repeat 146 167 IPR001611 GO:0005515
Gma18g01116 737 Gene3D Phosphorylase Kinase; domain 1 417 533 - -
Gma18g01116 737 Pfam Protein kinase domain 456 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01116 737 ProSiteProfiles Protein kinase domain profile. 450 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01116 737 PANTHER OS07G0166700 PROTEIN 8 730 IPR045272 GO:0004714|GO:0006468
Gma18g01116 737 SUPERFAMILY Protein kinase-like (PK-like) 431 718 IPR011009 -
Gma18g01116 737 Gene3D Ribonuclease Inhibitor 216 340 IPR032675 -
Gma18g01116 737 SUPERFAMILY L domain-like 29 323 - -
Gma18g01116 737 Gene3D Ribonuclease Inhibitor 29 215 IPR032675 -
Gma18g01116 737 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 8 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01116 Gma-Chr18 16181294 16185330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01116 24 673 Miscellaneous Gene Families AT2G02780 47.910 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Gma18g01116 Pkinase 6.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01116 - - gmx:100803061 1382.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01116 18 16181294 16185330 Gma18g01116 18 16181294 16185330 ECH