Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01115 ATGGGAAGACAAAGTCCTGGAAAATGGATCAGAAACTTACTTCTGGGGAAGAAATCATCATCAAAGTCTAAGTCTTCAAGAGAGAAAGATATTTATAAACCTTCAAGTAACATGGATGTTCTGGTGGTGTCTTCCGAGACATCCATGTCTACTCCAACATCTGGAGCCAATGCTATTAAAGGAGTGCTATCAGAAAAGGAAGTAGTTAGTGTATCATCAAATGATGGGGTAATTCTTTCAATTGAAGACAAACAGGACAAAGCACAATCACTCGCTAATATTGGTTCTGGGGACCATCAAGAAAAAATCGGGCAAATAGAAGCAGCTATAATAGTTCAGGCTGCTATTAGAGGCTATCAGGCGCGTGGGACATTTAAAACTCTCAAAAGTGTCATACCACTGCAAGCTTATATTCGTGGCCTGTTGGTTCGACGACAAGCTGTTTCTGCTTTATATTGTGTGCAGTCAATAGTTAAATTTCAAGCATTGGCTCGTGGGTACAAGGTTAGGCACTCTGATGTTGGGCTTGCAGTCCAGAAAATTTTTAAGGATACTAAACTTCCGAATTTTATTGGAGTAGATTCAACCACACAGGCAGGGAAGCTCTCGGATAGTATCTTTATTAACAAGCTTCAGGCTTCATCACCCTCTTCTGTTTCTCCAAATCTCAAATATAATGCTGGTGAACCTAACTTGGCTTGGGAGTGGCTTGATCGCTGGACGAAATCACACTTTTGGGTACCTCTTCGAGAAGCGCGGAAACCTGATTCAATGTCTGATAAGAAAAATGGAAGTTGTCAAATAGTTGAAACTAACAAGGGTCAAGTTAAAAGAAATGCCAGGAAAGCACCTTCTGTGAGGGCTGGTGATGATTCAGTTTCAGATTCTAACAAACATAAATGCTATCCGAAAAAGGATTCAAACCTCCCATTGCATTCAGCCAAGGAACATCCACAAAAGGATCTTGAGAAAAGGAGTTCTAAAAAACCTCAAATTCAGAATGGTTTTGATAAATCCGAGGTTGCTAATAAGAAAAGAACACACATCACAAGAAAAGTTTCAGATCATACAACAGTCACTGATGTTCAAGAGGATGATGCTGGTGCTCCTTCAAAGAAGTTGGAAGGTTTGGCAGTGTCAGAGTCAAAACAGTCTGATCTTGAAAAAAGTTTAGGACAGCAAACAGAAGAGCATGATACTAATGAGTCATGTAATGATACTAATGCTCCCTTGCAGTCTAGCTTGGTGAATGGTAAAGATGGAGAATTCATTGAGGACTTGAATAATGTAAATTCAAAGAATTTCCAGAGAAGAGCTTCCCTGCCGGCTAATTTTGCAGATCATGAAAATCTGTTACATAATAACACTCCAAGACGCCCTAGTTATATGGCTCCCACTGAATCTACAAAAGCTAAGCTAAGAGGACATGAACAAGGCTCTCCAAGGTCTGTTAGCGATTTGGCGGACGTAAGTAGTATAACCAGGCGGCTTTCACTTTCGTCTTCGCTTAATGGCAAGCTAGGTTCATTCCCTCCATGGTCAGATAGATTGGCTGCCTTGAGCAACAAGATAAGGACCAACAGATGTCTATCATCTTCAAAGGATGGCACTGATAAATTGATCCAACCTAAGTGGAGAAGGTGA 1644 0.4063 MGRQSPGKWIRNLLLGKKSSSKSKSSREKDIYKPSSNMDVLVVSSETSMSTPTSGANAIKGVLSEKEVVSVSSNDGVILSIEDKQDKAQSLANIGSGDHQEKIGQIEAAIIVQAAIRGYQARGTFKTLKSVIPLQAYIRGLLVRRQAVSALYCVQSIVKFQALARGYKVRHSDVGLAVQKIFKDTKLPNFIGVDSTTQAGKLSDSIFINKLQASSPSSVSPNLKYNAGEPNLAWEWLDRWTKSHFWVPLREARKPDSMSDKKNGSCQIVETNKGQVKRNARKAPSVRAGDDSVSDSNKHKCYPKKDSNLPLHSAKEHPQKDLEKRSSKKPQIQNGFDKSEVANKKRTHITRKVSDHTTVTDVQEDDAGAPSKKLEGLAVSESKQSDLEKSLGQQTEEHDTNESCNDTNAPLQSSLVNGKDGEFIEDLNNVNSKNFQRRASLPANFADHENLLHNNTPRRPSYMAPTESTKAKLRGHEQGSPRSVSDLADVSSITRRLSLSSSLNGKLGSFPPWSDRLAALSNKIRTNRCLSSSKDGTDKLIQPKWRR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01115 547 MobiDBLite consensus disorder prediction 292 331 - -
Gma18g01115 547 MobiDBLite consensus disorder prediction 339 371 - -
Gma18g01115 547 SMART iq_5 152 174 IPR000048 GO:0005515
Gma18g01115 547 SMART iq_5 127 148 IPR000048 GO:0005515
Gma18g01115 547 SMART iq_5 104 126 IPR000048 GO:0005515
Gma18g01115 547 Gene3D - 105 152 - -
Gma18g01115 547 Pfam Protein of unknown function (DUF4005) 453 510 IPR025064 -
Gma18g01115 547 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Gma18g01115 547 MobiDBLite consensus disorder prediction 450 489 - -
Gma18g01115 547 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 544 - -
Gma18g01115 547 Pfam IQ calmodulin-binding motif 130 146 IPR000048 GO:0005515
Gma18g01115 547 Pfam IQ calmodulin-binding motif 107 122 IPR000048 GO:0005515
Gma18g01115 547 Pfam IQ calmodulin-binding motif 155 170 IPR000048 GO:0005515
Gma18g01115 547 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Gma18g01115 547 PANTHER IQ-DOMAIN 5-RELATED 1 544 - -
Gma18g01115 547 MobiDBLite consensus disorder prediction 253 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01115 Gma-Chr18 16136569 16141916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01115 1 547 IQD Protein Family AT1G14380 30.956 2.39e-54 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01115 - - gmx:100794768 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01115 18 16136569 16141916 Gma18g01115 18 16136569 16141916 ECH
Gma18g01115 18 16136569 16141916 Gma06g01707 06 17208312 17218562 ECH
Gma18g01115 18 16136569 16141916 Gma04g01676 04 45580518 45587717 ECH
Gma18g01115 18 16136569 16141916 Gma05g00278 05 2504957 2512810 ECH
Gma18g01115 18 16136569 16141916 Gma17g00925 17 7894922 7902093 ECH