Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01111 ATGGGTAATTGTCTAGATTCTTCAGCTAAAGTAGAAGCAGCTCACAGTTCCAGAACCCCTTCTGGAATTTCAAAAACTAGTCCTTCATCTGTTCCTTCCAACTTATCTATTCTGTCATATAGTGAAGCAAGTGATTTCTCAAATCTTCCCACACCGAGGTCCGAGGGTGAAATCTTGTCTTCCCCAAATCTTAAGGCCTTTACCTTTAACGAGCTAAAGAATGCCACCAGGAACTTTCGCCCCGACAGCCTTCTTGGTGAAGGAGGATTTGGTTTTGTTTACAAGGGGTGGATTGATGAACACACACTTACAGCTTCAAAACCTGGATCAGGAATGGTTGTTGCTGTTAAGAAACTCAAGCCTGAAGGGTTACAGGGTCATAAGGAGTGGCTGACTGAAGTGGACTACCTTGGACAACTTCACCATCAGAATCTGGTAAAATTGATTGGATATTGCGTGGAGGGAGAGAATCGGCTGTTGGTATATGAGTTTATGTCCAAAGGGAGCTTAGAGAATCATCTGTTTAGAAGAGGACCACAACCTCTTTCTTGGTCAGTGAGGATGAAAGTAGCCATTGGTGCTGCCAGAGGACTTTCTTTTCTTCATAATGCCAAATCACAAGTTATATACCGTGATTTTAAAGCATCCAATATCCTACTAGACGCAgagttcaatgctaaactctctgattttggcttagcaaaggctggccctacgggtgatagaactcatgtctctactcaagtcatgggaactcaaggatacgcagcacctgaatatGTTGCAACAGgtcggctgacagctaaaagtgatgtatacagctttggggttgtgttgcttgaactattgtccggtagacgtgccgttgacagatcaaaagccggtgaagagcagaatctagtAGAATGGGCAAAACCATATTTGGGTGACAAAAGAAGACTATTTCGGATTATGGACACCAAGTTGGGTGGCCAATACCCACAAAAAGGAGCCTACATGGCTGCCACTCTTGCTCTAAAATGCCTTAATCGCGAAGCTAAGGCAAGGCCTCCAATGACAGAGGTTTTAGAAACCCTTGAACTGATTGCAACCTCAAAACCTGCAGGAAGAAACTGCCAATTAGAACAAAAGAGAGTCCATGCTCCTGACAGAAAGTCTAGTGTGCAAAAAGGGTCCCATTTGAATCATACTCCTACTGCATTCCCATAA 1209 0.3515 MGNCLDSSAKVEAAHSSRTPSGISKTSPSSVPSNLSILSYSEASDFSNLPTPRSEGEILSSPNLKAFTFNELKNATRNFRPDSLLGEGGFGFVYKGWIDEHTLTASKPGSGMVVAVKKLKPEGLQGHKEWLTEVDYLGQLHHQNLVKLIGYCVEGENRLLVYEFMSKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRSKAGEEQNLVEWAKPYLGDKRRLFRIMDTKLGGQYPQKGAYMAATLALKCLNREAKARPPMTEVLETLELIATSKPAGRNCQLEQKRVHAPDRKSSVQKGSHLNHTPTAFP 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01111 402 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 11 402 - -
Gma18g01111 402 CDD STKc_IRAK 85 362 - -
Gma18g01111 402 ProSitePatterns Protein kinases ATP-binding region signature. 85 118 IPR017441 GO:0005524
Gma18g01111 402 Gene3D Transferase(Phosphotransferase) domain 1 165 385 - -
Gma18g01111 402 PANTHER OS01G0588500 PROTEIN-RELATED 11 402 - -
Gma18g01111 402 SUPERFAMILY Protein kinase-like (PK-like) 54 360 IPR011009 -
Gma18g01111 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Gma18g01111 402 MobiDBLite consensus disorder prediction 1 33 - -
Gma18g01111 402 MobiDBLite consensus disorder prediction 373 402 - -
Gma18g01111 402 MobiDBLite consensus disorder prediction 376 390 - -
Gma18g01111 402 Gene3D Phosphorylase Kinase; domain 1 55 164 - -
Gma18g01111 402 ProSiteProfiles Protein kinase domain profile. 79 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma18g01111 402 MobiDBLite consensus disorder prediction 10 33 - -
Gma18g01111 402 Pfam Protein tyrosine and serine/threonine kinase 83 359 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01111 Gma-Chr18 15995243 15998925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01111 55 365 Glycoside Hydrolase AT3G07070 52.866 1.49e-114 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma18g01111 PK_Tyr_Ser-Thr 7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01111 - - gmx:100802537 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g01111 18 15995243 15998925 Gma18g01111 18 15995243 15998925 ECH