Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01102 ATGTGTGTGCACTTAGGCTGGCTTCTTGGTGTGGGTAGCCACATGCAGGAGCTTAGGAGAGTCAAGTTTGGGATCATGGGGGAGAAGGATAACATGGTCACCATGCATGATGTCATGGATGCTCAATGGGTTTATGATAATTATAGGGATGAGACTTATTTGAGGAGGGTTGTTATGCCCATGGAGATTCTTCTGACTAGCTATAAAAGGCTTGTTGTCAATGCTATTTGTTATGGTGCTAAGTTCATGATTCCTGGATTAATTTTAAACTTAGTCACAATAGGACATTTACCATTACCATATGGTATAATCATATTAAATTTTGAAAGCTGA 333 0.3934 MCVHLGWLLGVGSHMQELRRVKFGIMGEKDNMVTMHDVMDAQWVYDNYRDETYLRRVVMPMEILLTSYKRLVVNAICYGAKFMIPGLILNLVTIGHLPLPYGIIILNFES 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01102 110 SUPERFAMILY Pseudouridine synthase 1 66 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Gma18g01102 110 PANTHER BNAA02G21770D PROTEIN 1 88 - -
Gma18g01102 110 PANTHER CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5 1 88 IPR004802 GO:0006396
Gma18g01102 110 Pfam tRNA pseudouridylate synthase B C-terminal domain 1 65 IPR032819 -
Gma18g01102 110 Gene3D Pseudouridine synthase 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01102 Gma-Chr18 15557518 15557850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01102 15 88 NAC Transcription Factor Family AT3G57150 75.949 4.49e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01102 K11131 - gmx:100806355 167.162