Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01100 ATGAACAAGATCCCCACAATGGTGAAGCACTTGGTGAAAGAGGGCATGCCCCTAAGTTTGGGGACATCAACATCCTTGAATTCCACCATGGCGGAATTCTCAGCTGATCCTGGCTTTGCTGAGAAGGCTACAAAGCTTTGTTGCTTTGGAAGTAGGAGTTTCAATGGCATGACCACCCAATTGTGCCTCAACATTGCTGAATTGGCTCAAAGATCTTCTCCATTGGTGTAA 231 0.4632 MNKIPTMVKHLVKEGMPLSLGTSTSLNSTMAEFSADPGFAEKATKLCCFGSRSFNGMTTQLCLNIAELAQRSSPLV 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01100 76 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 18 74 IPR024097 GO:0006355
Gma18g01100 76 PANTHER - 18 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01100 Gma-Chr18 15494511 15494741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01100 30 58 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G48560 72.414 1.39e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01100 - - gmx:100812081 136.346