Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01089 ATGGAAGAACAAAGAGTTCATCACGATGAAAACGTGACTCGCAAGCCCAATTTCCCGCTACAGCTGCTGGAGAAAAAGGATGAGGGACCGCCGCCGCCGCCGAGCGCAGCCAAGGCGAAGCGAGCACCGACGAAGGACAGACACACGAAGGTGGAGGGGCGGGGGCGGCGGATCCGGATGCCGGCGGCGTGCGCGGCGAGGGTGTTCCAGCTGACGCGCGAGCTCGGCCACAAGTCCGACGGTGAGACCATCGAGTGGCTGCTCCGGGAGGCCGAGCCCGCCGTCATCTCCGCCACCGGCACCGGCACCATCCCCGCCAACTTCACTTCGCTCAACGTCTCCCTCCGCAGCTCCGGCTCCTCCCAGTCCCACTACTTCCTCAACCGCCACAACAATCTTCACAATCACAACACCAACAACTATCCCTTCTTCACAACAACAACACCACCCGAATTTTCTTCTTCAGGATCGTATTTTAAATCACACCCAAGTTTTAGTCTTATGCAAAATTCTAGAAGGTTCTCGCGAAAGAGGAGGCATGAGGTGATTTCGCACGTGGGGAATTATTGCTTGTCGCAGATGTGTACGGACTCCGTTCCCGCCATGATGAGTGGTGCTGATTCAGTTTGGGCGATTCCCTCCGTGGCTTCTTCTTCTGCGAGTGGCATTCATTTTACGAATTTTGCTTCGCTGTTGACCGGTCAACACGTGGGTGGTGCAATGGTGAGTAGTGAAACAAACTTCAATGTGCTTGCAACGCTTAATGCGTATTCCGGCCAACAACCACATCATCGCCATGAAGGAGAAGAAACAAACAACTAG 822 0.5511 MEEQRVHHDENVTRKPNFPLQLLEKKDEGPPPPPSAAKAKRAPTKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLREAEPAVISATGTGTIPANFTSLNVSLRSSGSSQSHYFLNRHNNLHNHNTNNYPFFTTTTPPEFSSSGSYFKSHPSFSLMQNSRRFSRKRRHEVISHVGNYCLSQMCTDSVPAMMSGADSVWAIPSVASSSASGIHFTNFASLLTGQHVGGAMVSSETNFNVLATLNAYSGQQPHHRHEGEETNN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01089 273 MobiDBLite consensus disorder prediction 1 56 - -
Gma18g01089 273 MobiDBLite consensus disorder prediction 40 56 - -
Gma18g01089 273 Pfam TCP family transcription factor 43 180 IPR017887 -
Gma18g01089 273 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 267 IPR005333 GO:0003700
Gma18g01089 273 ProSiteProfiles TCP domain profile. 44 98 IPR017887 -
Gma18g01089 273 PANTHER TRANSCRIPTION FACTOR TCP23 28 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01089 Gma-Chr18 15177275 15178096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01089 9 136 TCP Transcription Factor Family AT1G69690 56.962 1.34e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma18g01089 TCP 6.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01089 - - gmx:121174062 491.886