Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma18g01071 ATGCCTCAACTCCTCCCTCACCGCACGAACTCGCGGTTCTCCCCTTCGAAGACGCCGGCGAAGATAGCTTTGTTGAACCACCAGAAAGAGGCCAAGCTCTTCGTTGGGAACTTGCCTTATGACGTTGATAACCAGAAATTGGCCATGCTTTTCGAACAAGTCGGAACCGTTGAAATCGCTGAGGTTATTTATAATAGGAAAACTGACCAAAGTCGCGGGTTTAGGTTTGTGACGATGAGTACTGTTGAAGAAGCTGAAAGCGCTGTGGAGAAATTCAACCGCTATATAAGTTGA 294 0.4728 MPQLLPHRTNSRFSPSKTPAKIALLNHQKEAKLFVGNLPYDVDNQKLAMLFEQVGTVEIAEVIYNRKTDQSRGFRFVTMSTVEEAESAVEKFNRYIS 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma18g01071 97 PANTHER OS02G0815200 PROTEIN 28 95 - -
Gma18g01071 97 SMART rrm1_1 32 97 IPR000504 GO:0003723
Gma18g01071 97 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 33 95 IPR000504 GO:0003723
Gma18g01071 97 SUPERFAMILY RNA-binding domain, RBD 28 95 IPR035979 GO:0003676
Gma18g01071 97 Gene3D - 7 96 IPR012677 -
Gma18g01071 97 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 31 97 IPR000504 GO:0003723
Gma18g01071 97 PANTHER RIBONUCLEOPROTEIN 28 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma18g01071 Gma-Chr18 14807395 14807889 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma18g01071 31 93 Eukaryotic Initiation Factors Gene Family AT2G23350 39.683 3.13e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma18g01071 - - gmx:100790280 124.79